Evidence map›Paper›PMID 34162703›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, "subfossil" koala lemur

Stephanie Marciniak, Mehreen R Mughal, Laurie R Godfrey, Richard J Bankoff, Heritiana Randrianatoandro, Brooke E Crowley, Christina M Bergey, Kathleen M Muldoon, Jeannot Randrianasy, Brigitte M Raharivololona and 6 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
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  9. Ancient DNA from the koala lemur puts Madagascar on the paleogenomic map.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Evolutionary and phylogenetic insights from a nuclear genome sequence of the extinct, giant, "subfossil" koala lemurProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 3 countries.

Stephanie MarciniakDepartment of Anthropology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0002-0052-8919
Mehreen R MughalBioinformatics and Genomics Intercollege Graduate Program, Pennsylvania State University, University Park, PA 16082.
Laurie R GodfreyDepartment of Anthropology, University of Massachusetts, Amherst, MA 01003.ORCID 0000-0001-9997-0207
Richard J BankoffDepartment of Anthropology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0003-4573-9290
Heritiana RandrianatoandroDepartment of Anthropology, Pennsylvania State University, University Park, PA 16802.
Brooke E CrowleyDepartment of Geology, University of Cincinnati, Cincinnati, OH 45220.ORCID 0000-0002-8462-6806
Christina M BergeyDepartment of Anthropology, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0001-8336-8078
Kathleen M MuldoonDepartment of Anatomy, Midwestern University, Glendale, AZ 85308.
Jeannot RandrianasyMention Anthropobiologie et Développement Durable, Faculté des Sciences, Université d'Antananarivo, Antananarivo 101, Madagascar.
Brigitte M RaharivololonaMention Anthropobiologie et Développement Durable, Faculté des Sciences, Université d'Antananarivo, Antananarivo 101, Madagascar.ORCID 0000-0001-9021-6056
Stephan C SchusterSingapore Centre for Environmental Life Sciences Engineering, Nanyang Technological University, Singapore 639798.ORCID 0000-0001-9082-7527
Ripan S MalhiDepartment of Anthropology, University of Illinois Urbana-Champaign, Urbana, IL 61801.ORCID 0000-0002-1484-0292
Anne D YoderDepartment of Biology, Duke University, Durham, NC 27708.ORCID 0000-0002-1781-9552
Edward E LouisDepartment of Conservation Genetics, Omaha's Henry Doorly Zoo and Aquarium, Omaha, NE 68107; ghp3@psu.edu KistlerL@si.edu edlo@omahazoo.com.ORCID 0000-0002-3634-4943
Logan KistlerDepartment of Anthropology, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560; ghp3@psu.edu KistlerL@si.edu edlo@omahazoo.com.ORCID 0000-0002-5730-5986
George H PerryDepartment of Anthropology, Pennsylvania State University, University Park, PA 16802; ghp3@psu.edu KistlerL@si.edu edlo@omahazoo.com.ORCID 0000-0003-4527-3806
Pennsylvania State University · USUniversity of Antananarivo · MGDuke University · USMidwestern University · USNanyang Technological University · SGRutgers, The State University of New Jersey · USSmithsonian Institution · USUniversity of Cincinnati · USUniversity of Illinois Urbana-Champaign · USUniversity of Massachusetts Amherst · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

No endemic Madagascar animal with body mass >10 kg survived a relatively recent wave of extinction on the island. From morphological and isotopic analyses of skeletal "subfossil" remains we can reconstruct some of the biology and behavioral ecology of giant lemurs (primates; up to ∼160 kg) and other extraordinary Malagasy megafauna that survived into the past millennium. Yet, much about the evolutionary biology of these now-extinct species remains unknown, along with persistent phylogenetic uncertainty in some cases. Thankfully, despite the challenges of DNA preservation in tropical and subtropical environments, technical advances have enabled the recovery of ancient DNA from some Malagasy subfossil specimens. Here, we present a nuclear genome sequence (∼2× coverage) for one of the largest extinct lemurs, the koala lemur

Indexed as

Extinction, BiologicalGenomePhylogenyAmino AcidsAnimalsBase SequenceCell NucleusEvolution, MolecularGenomicsHerbivoryLemurAmino Acidsconvergent evolutiondietary reconstructionmegafaunal extinctionpaleogenomicsphylogenomics

Identifiers

PMID34162703
PMCPMC8255780
OpenAlexW3173428818

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.