Evidence map›Paper›PMID 34161274›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

A single-cell-resolution fate map of endoderm reveals demarcation of pancreatic progenitors by cell cycle.

Yun Yang, Hao Wang, Jia He, Wenchao Shi, Zhanmei Jiang, Lina Gao, Yan Jiang, Rui Ni, Qifen Yang, Lingfei Luo

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
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  9. Zebrafish: a convenient tool for myelopoiesis research.Cell regeneration (London, England) · 2023
    Review
  10. Article
  11. Intestinal precursors avoid being misinduced to liver cells by activating Cdx-Wnt inhibition cascade.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Notch-Sox9 Axis Mediates Hepatocyte Dedifferentiation inInternational journal of molecular sciences · 2022
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yun YangInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0001-8009-5246
Hao WangInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0002-9035-7526
Jia HeInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0002-8621-993X
Wenchao ShiInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0001-9341-8518
Zhanmei JiangInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0002-9868-7589
Lina GaoInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0001-7273-102X
Yan JiangInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0003-0689-5477
Rui NiInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0001-6135-816X
Qifen YangInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China.ORCID 0000-0002-4525-9513
Lingfei LuoInstitute of Developmental Biology and Regenerative Medicine, Southwest University, 400715 Chongqing, China; lluo@swu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A progenitor cell could generate a certain type or multiple types of descendant cells during embryonic development. To make all the descendant cell types and developmental trajectories of every single progenitor cell clear remains an ultimate goal in developmental biology. Characterizations of descendant cells produced by each uncommitted progenitor for a full germ layer represent a big step toward the goal. Here, we focus on early foregut endoderm, which generates foregut digestive organs, including the pancreas, liver, foregut, and ductal system, through distinct lineages. Using unbiased single-cell labeling techniques, we label every individual zebrafish foregut endodermal progenitor cell out of 216 cells to visibly trace the distribution and number of their descendant cells. Hence, single-cell-resolution fate and proliferation maps of early foregut endoderm are established, in which progenitor regions of each foregut digestive organ are precisely demarcated. The maps indicate that the pancreatic endocrine progenitors are featured by a cell cycle state with a long G1 phase. Manipulating durations of the G1 phase modulates pancreatic progenitor populations. This study illustrates foregut endodermal progenitor cell fate at single-cell resolution, precisely demarcates different progenitor populations, and sheds light on mechanistic insights into pancreatic fate determination.

Indexed as

Cell CycleSingle-Cell AnalysisAnimalsCell LineageCell ProliferationEndodermG1 PhaseHedgehog ProteinsPancreasSignal TransductionStem CellsZebrafishZebrafish ProteinsHedgehog ProteinsShha protein, zebrafishZebrafish Proteinscell cycleendodermfate mappancreatic fatesingle-cell labeling and tracing

Identifiers

PMID34161274
PMCPMC8237672

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.