Evidence map›Paper›PMID 34158533›Full record

ArticleScientific reports2021

Genomic history of human monkey pox infections in the Central African Republic between 2001 and 2018.

Nicolas Berthet, Stéphane Descorps-Declère, Camille Besombes, Manon Curaudeau, Andriniaina Andy Nkili Meyong, Benjamin Selekon, Ingrid Labouba, Ella Cyrielle Gonofio, Rita Sem Ouilibona, Huguette Dorine Simo Tchetgna and 7 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05058898 (A One Health Study of Monkeypox Human Infection, Animal Reservoir, Disease Ecology and Diagnostic Tools), which is not on this map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
25.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05058898 unknown statusnot on this map

A One Health Study of Monkeypox Human Infection, Animal Reservoir, Disease Ecology and Diagnostic Tools

TypeobservationalSponsorInstitut PasteurRan2021 to 2023Enrolled280ConditionsMonkeypox Virus InfectionArmsblood samples, Scabs and pus samples
3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 187 citations in OpenAlex.

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  20. Ongoing mpox outbreak in Kamituga, South Kivu province, associated with monkeypox virus of a novel Clade I sub-lineage, Democratic Republic of the Congo, 2024.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024
    Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 5 countries.

Nicolas BerthetThe Center for Microbes, Development and Health, CAS Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai-Chinese Academy of Sciences, Discovery and Molecular Characterization of Pathogens, No. 320 Yueyang Road, XuHui District, Shanghai, 200031, China. nicolas.berthet@pasteur.fr.
Stéphane Descorps-DeclèreInstitut Pasteur, Centre of Bioinformatics, Biostatistics and Integrative Biology (C3BI), Paris, France.
Camille BesombesInstitut Pasteur, Emerging Diseases Epidemiology Unit, Paris, France.
Manon CuraudeauInstitut de Systématique, Évolution, Biodiversité (ISYEB), Sorbonne Université, MNHN, CNRS, EPHE, UA, Paris, France.
Andriniaina Andy Nkili MeyongCentre International de Recherches Médicales de Franceville (CIRMF), Franceville, Gabon.
Benjamin SelekonInstitut Pasteur de Bangui, Bangui, Central African Republic.
Ingrid LaboubaCentre International de Recherches Médicales de Franceville (CIRMF), Franceville, Gabon.
Ella Cyrielle GonofioInstitut Pasteur de Bangui, Bangui, Central African Republic.
Rita Sem OuilibonaInstitut Pasteur de Bangui, Bangui, Central African Republic.
Huguette Dorine Simo TchetgnaCentre International de Recherches Médicales de Franceville (CIRMF), Franceville, Gabon.
Maxence FeherInstitut Pasteur, Unité Environnement et Risque Infectieux, Cellule d'Intervention Biologique d'Urgence, Paris, France.
Arnaud FontanetInstitut Pasteur, Emerging Diseases Epidemiology Unit, Paris, France.
Mirdad KazanjiInstitut Pasteur de Bangui, Bangui, Central African Republic.
Jean-Claude ManuguerraInstitut Pasteur, Unité Environnement et Risque Infectieux, Cellule d'Intervention Biologique d'Urgence, Paris, France.
Alexandre HassaninInstitut Pasteur, Emerging Diseases Epidemiology Unit, Paris, France.
Antoine GessainInstitut Pasteur, Unité d'Epidémiologie et Physiopathologie des Virus Oncogènes, Département de Virologie, Paris, France.
Emmanuel NakouneInstitut Pasteur de Bangui, Bangui, Central African Republic.
Institut Pasteur de Bangui · CFCentre International de Recherches Médicales de Franceville · GAInstitut Pasteur · FRLaboratoire National de Référence · MAUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes · FRCentre de Gestion Scientifique · FRÉcole Pratique des Hautes Études · FRInstitut Pasteur of Shanghai · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monkeypox is an emerging infectious disease, which has a clinical presentation similar to smallpox. In the two past decades, Central Africa has seen an increase in the frequency of cases, with many monkeypox virus (MPXV) isolates detected in the Democratic Republic of Congo (DRC) and the Central African Republic (CAR). To date, no complete MPXV viral genome has been published from the human cases identified in the CAR. The objective of this study was to sequence the full genome of 10 MPXV isolates collected during the CAR epidemics between 2001 and 2018 in order to determine their phylogenetic relationships among MPXV lineages previously described in Central Africa and West Africa. Our phylogenetic results indicate that the 10 CAR isolates belong to three lineages closely related to those found in DRC. The phylogenetic pattern shows that all of them emerged in the rainforest block of the Congo Basin. Since most human index cases in CAR occurred at the northern edge of western and eastern rainforests, transmissions from wild animals living in the rainforest is the most probable hypothesis. In addition, molecular dating estimates suggest that periods of intense political instability resulting in population movements within the country often associated also with increased poverty may have led to more frequent contact with host wild animals. The CAR socio-economic situation, armed conflicts and ecological disturbances will likely incite populations to interact more and more with wild animals and thus increase the risk of zoonotic spillover.

Indexed as

Biological EvolutionCentral African RepublicEvolution, MolecularGenomicsHumansMonkeypox virusMpox, MonkeypoxPhylogeny

Identifiers

PMID34158533
PMCPMC8219716
OpenAlexW3173526783

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.