Evidence map›Paper›PMID 34158497›Full record

ArticleNature communications2021

Structural basis of substrate recognition and translocation by human ABCA4.

Tian Xie, Zike Zhang, Qi Fang, Bowen Du, Xin Gong

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
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  9. Article
  10. Activation of GSDME by all-International journal of biological sciences · 2025
    Article
  11. Article
  12. Assessment of ABCA4 Genetic Variants: Current Landscape and Future Prospects.Advances in experimental medicine and biology · 2025
    Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Cryo-EM structures of a mycobacterial ABC transporter that mediates rifampicin resistance.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. The ABC's of Alzheimer risk gene ABCA7.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Tian Xie *Department of Biology, Southern University of Science and Technology, Shenzhen, Guangdong, China.ORCID 0000-0002-5445-664X
Zike Zhang *Department of Biology, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Qi FangDepartment of Biology, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Bowen DuDepartment of Biology, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Xin GongDepartment of Biology, Southern University of Science and Technology, Shenzhen, Guangdong, China. gongx@sustech.edu.cn.ORCID 0000-0003-3469-7718
Southern University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human ATP-binding cassette (ABC) subfamily A (ABCA) transporters mediate the transport of various lipid compounds across the membrane. Mutations in human ABCA transporters have been described to cause severe hereditary disorders associated with impaired lipid transport. However, little is known about the mechanistic details of substrate recognition and translocation by ABCA transporters. Here, we present three cryo-EM structures of human ABCA4, a retina-specific ABCA transporter, in distinct functional states at resolutions of 3.3-3.4 Å. In the nucleotide-free state, the two transmembrane domains (TMDs) exhibit a lateral-opening conformation, allowing the lateral entry of substrate from the lipid bilayer. The N-retinylidene-phosphatidylethanolamine (NRPE), the physiological lipid substrate of ABCA4, is sandwiched between the two TMDs in the luminal leaflet and is further stabilized by an extended loop from extracellular domain 1. In the ATP-bound state, the two TMDs display a closed conformation, which precludes the substrate binding. Our study provides a molecular basis to understand the mechanism of ABCA4-mediated NRPE recognition and translocation, and suggests a common 'lateral access and extrusion' mechanism for ABCA-mediated lipid transport.

Indexed as

Protein DomainsAdenosine TriphosphateATP-Binding Cassette TransportersBiological TransportCell MembraneCryoelectron MicroscopyHumansModels, MolecularPhosphatidylethanolaminesPhospholipidsProtein BindingRetinoidsABCA4 protein, humanAdenosine TriphosphateATP-Binding Cassette TransportersN-retinylidene-phosphatidylethanolaminePhosphatidylethanolaminesPhospholipidsRetinoids

Identifiers

PMID34158497
PMCPMC8219669
OpenAlexW3177311886

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.