Evidence map›Paper›PMID 34157644›Full record

ArticleNeural networks : the official journal of the International Neural Network Society2021

Fast mesh data augmentation via Chebyshev polynomial of spectral filtering.

Shih-Gu Huang, Moo K Chung, Anqi Qiu, Alzheimer’s Disease Neuroimaging Initiative

Abstract read
In one paragraph

Article in Neural networks : the official journal of the International Neural Network Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Shih-Gu HuangDepartment of Biomedical Engineering, National University of Singapore, Singapore.
Moo K ChungDepartment of Biostatistics and Medical Informatics, University of Wisconsin, Madison, WI 53706, United States of America.
Anqi QiuDepartment of Biomedical Engineering, National University of Singapore, Singapore; Institute of Data Science, National University of Singapore, Singapore; The N.1 Institute for Health, National University of Singapore, Singapore; The Johns Hopkins University, MD, USA. Electronic address: bieqa@nus.edu.sg.
Alzheimer’s Disease Neuroimaging Initiative

Funding

BRAIN Initiative: Theories, Models and Methods for Analysis of Complex Data from the BrainR01EB022856 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2016 to 2018
$1.1M
Dynamic manifold-valued time series model in functional brain imagingR01EB028753 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2020 to 2022
$942k
NIBIB NIH HHS R01 EB022856NIBIB NIH HHS R01 EB028753
6 · The paper itself

Abstract

Deep neural networks have recently been recognized as one of the powerful learning techniques in computer vision and medical image analysis. Trained deep neural networks need to be generalizable to new data that are not seen before. In practice, there is often insufficient training data available, which can be solved via data augmentation. Nevertheless, there is a lack of augmentation methods to generate data on graphs or surfaces, even though graph convolutional neural network (graph-CNN) has been widely used in deep learning. This study proposed two unbiased augmentation methods, Laplace-Beltrami eigenfunction Data Augmentation (LB-eigDA) and Chebyshev polynomial Data Augmentation (C-pDA), to generate new data on surfaces, whose mean was the same as that of observed data. LB-eigDA augmented data via the resampling of the LB coefficients. In parallel with LB-eigDA, we introduced a fast augmentation approach, C-pDA, that employed a polynomial approximation of LB spectral filters on surfaces. We designed LB spectral bandpass filters by Chebyshev polynomial approximation and resampled signals filtered via these filters in order to generate new data on surfaces. We first validated LB-eigDA and C-pDA via simulated data and demonstrated their use for improving classification accuracy. We then employed brain images of the Alzheimer's Disease Neuroimaging Initiative (ADNI) and extracted cortical thickness that was represented on the cortical surface to illustrate the use of the two augmentation methods. We demonstrated that augmented cortical thickness had a similar pattern to observed data. We also showed that C-pDA was faster than LB-eigDA and can improve the AD classification accuracy of graph-CNN.

Indexed as

Alzheimer DiseaseSurgical MeshAlgorithmsHumansNeural Networks, ComputerNeuroimagingCortical thicknessData augmentationGraph-CNNLaplace–Beltrami operatorSignals on surfaces

Identifiers

PMID34157644
PMCPMC8585629

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.