Evidence map›Paper›PMID 34156584›Full record

ArticleVirus genes2021

Identification of a phage-derived depolymerase specific for KL64 capsule of Klebsiella pneumoniae and its anti-biofilm effect.

Min Li, Pei Li, Long Chen, Genglin Guo, Yuyi Xiao, Liang Chen, Hong Du, Wei Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Review
  14. Relationship between biofilm formation and antibiotic resistance ofFrontiers in cellular and infection microbiology · 2024
    Review
  15. Depolymerisation of theInternational journal of molecular sciences · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Min LiCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Pei LiCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Long ChenDepartment of Clinical Laboratory, Zhangjiagang Hospital Affiliated To Soochow University, Zhangjiagang, China.
Genglin GuoCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Yuyi XiaoCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China.
Liang ChenCenter for Discovery and Innovation, Hackensack-Meridian Health, Nutley, NJ, USA.
Hong DuDepartment of Clinical Laboratory, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Wei ZhangCollege of Veterinary Medicine, Nanjing Agricultural University, Nanjing, China. vszw@njau.edu.cn.ORCID http://orcid.org/0000-0002-3575-6225
Nanjing Agricultural University · CNSeton Hall University · USSoochow University · CN

Funding

National Natural Science Foundation of China U1803109
6 · The paper itself

Abstract

The increasing prevalence of Carbapenem-resistant Klebsiella pneumoniae (CRKP) poses a serious threat to global health. Phages and phage-derived enzymes gained increasing attention for controling CRKP infections. In this study, a lytic phage P510 infecting KL64 type K. pneumoniae was isolated and characterized. Whole genome analysis and electron microscopy analysis showed that phage P510 belonged to genus Przondovirus, family Autographiviridae, the order Caudovirales. The tail fiber protein of the phage was predicted to encode capsule depolymerase. Further analysis demonstrated that recombinant depolymerase P510dep had polysaccharide-degrading activity against KL64-types capsule of K. pneumoniae, and its lysis spectrum matched to host range of phage P510. We also demonstrated that the recombinant depolymerase was able to significantly inhibit biofilm formation. The discovery of the phage-derived depolymerase lays the foundation for controlling the spread of CRKPs.

Indexed as

BacteriophagesBiofilmsCarbapenem-Resistant EnterobacteriaceaeCaudoviralesGenome, ViralGlycoside HydrolasesHumansKlebsiella pneumoniaeViral Proteinscapsular-polysaccharide galactohydrolaseGlycoside HydrolasesViral ProteinsBacteriophagesBiofilmCapsular typeCarbapenem-resistantDepolymeraseKlebsiella pneumoniae

Identifiers

PMID34156584
OpenAlexW3175060602

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.