Evidence map›Paper›PMID 34156502›Full record

ArticleArchives of microbiology2021

Imbalance between peptidoglycan synthases and hydrolases regulated lysis of Lactobacillus bulgaricus in batch culture.

Shiwei Chen, Yifan Wu, Haiyue Niu, Jialei Sun, Xue Han, Lanwei Zhang

Abstract read
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In one paragraph

Article in Archives of microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. The Effect of Decreased CaFoods (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Shiwei ChenSchool of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150090, China.
Yifan WuSchool of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150090, China.
Haiyue NiuSchool of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150090, China.
Jialei SunSchool of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150090, China.
Xue HanSchool of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150090, China. xhan@hit.edu.cn.ORCID http://orcid.org/0000-0002-5276-8631
Lanwei ZhangSchool of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin, 150090, China. zhanglanwei@ouc.edu.cn.
Harbin Institute of Technology · CN

Funding

National Natural Science Foundation of China 31972972Natural Science Foundation of Heilongjiang Province of China C2018033
6 · The paper itself

Abstract

Lactobacillus bulgaricus is an important starter culture in the dairy industry, cell lysis is negative to the high density of this strain. This work describes the response of peptidoglycan synthases and hydrolases in Lactobacillus bulgaricus sp1.1 when pH decreasing in batch culture. First, the cell lysis was investigated by measuring the cytosolic lactate dehydrogenase released to the fermentation broth, a continuous increase in extracellular lactate dehydrogenase was observed after the lag phase in batch culture. Then, the peptidoglycan hydrolases profile analyzed using the zymogram method showed that eight proteins have the ability of peptidoglycan hydrolysis, three of the eight proteins were considered to contribute lysis of L. bulgaricus sp1.1 according to the changes and extents of peptidoglycan hydrolysis. In silico analysis showed that three putative peptidoglycan hydrolases, including N-acetylmuramyl-L-Ala amidase (protein ID: ALT46642.1), amidase (protein ID: ALT46641.1), and N-acetylmuramidase (protein ID: WP_013439201.1) were compatible with these proteins. Finally, the transcription of the three putative peptidoglycan hydrolases was upregulated in batch culture, in contrast, the expression of four peptidoglycan synthases was downregulated. These observations suggested the imbalance between peptidoglycan synthases and hydrolases involved in the lysis of Lactobacillus bulgaricus sp1.1.

Indexed as

Bacterial ProteinsBatch Cell Culture TechniquesLactobacillus delbrueckiiN-Acetylmuramoyl-L-alanine AmidasePenicillin-Binding ProteinsCell WallGene Expression Regulation, BacterialPeptidoglycanBacterial ProteinsN-Acetylmuramoyl-L-alanine AmidasePenicillin-Binding ProteinsPeptidoglycanAcid stressAutolysisLactobacillus bulgaricusPeptidoglycan hydrolasePeptidoglycan synthase

Identifiers

PMID34156502
OpenAlexW3176693227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.