Evidence map›Paper›PMID 34156292›Full record

ArticlemSystems2021

Multi-omics Study of Planobispora rosea, Producer of the Thiopeptide Antibiotic GE2270A.

Francesco Del Carratore, Marianna Iorio, Mercedes Pérez-Bonilla, Kamila Schmidt, Rosario Pérez-Redondo, Margherita Sosio, Sandy J Macdonald, Ivan S Gyulev, Areti Tsigkinopoulou, Gavin H Thomas and 5 more

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Francesco Del CarratoreManchester Institute of Biotechnology, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom.
Marianna IorioNAICONS Srl, Milan, Italy.
Mercedes Pérez-BonillaFundación MEDINA, Parque Tecnológico Ciencias de la Salud, Granada, Spain.
Kamila SchmidtManchester Institute of Biotechnology, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom.
Rosario Pérez-RedondoINBIOTEC Instituto de Biotecnología de León, León, Spain.
Margherita SosioNAICONS Srl, Milan, Italy.
Sandy J MacdonaldDepartment of Biology, University of Yorkgrid.5685.e, Heslington, York, United Kingdom.
Ivan S GyulevDepartment of Biology, University of Yorkgrid.5685.e, Heslington, York, United Kingdom.
Areti TsigkinopoulouManchester Institute of Biotechnology, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom.
Gavin H ThomasDepartment of Biology, University of Yorkgrid.5685.e, Heslington, York, United Kingdom.
Olga GenilloudFundación MEDINA, Parque Tecnológico Ciencias de la Salud, Granada, Spain.
Antonio Rodríguez-GarcíaINBIOTEC Instituto de Biotecnología de León, León, Spain.
Stefano DonadioNAICONS Srl, Milan, Italy.
Rainer BreitlingManchester Institute of Biotechnology, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom.
Eriko TakanoManchester Institute of Biotechnology, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom.
University of Manchester · GBUniversity of York · GBFundación Medina · ESInstituto de Biotecnología de León · ESNovo Nordisk Foundation · DK

Funding

Biotechnology and Biological Sciences Research Council BB/M017702/1H2020 Industrial Leadership (H2020 Priority Industrial Leadership) 720793UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/N01040X/1
6 · The paper itself

Abstract

Planobispora rosea is the natural producer of the potent thiopeptide antibiotic GE2270A. Here, we present the results of a metabolomics and transcriptomics analysis of P. rosea during production of GE2270A. The data generated provides useful insights into the biology of this genetically intractable bacterium. We characterize the details of the shutdown of protein biosynthesis and the respiratory chain associated with the end of the exponential growth phase. We also provide the first description of the phosphate regulon in

Indexed as

GE2270Agenome-scale metabolic modellingmetabolomicssecondary metabolismthiopeptidetranscriptomics

Identifiers

PMID34156292
PMCPMC8269224
OpenAlexW3175299949

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.