Evidence map›Paper›PMID 34155518›Full record

ArticleJournal of cell science2021

Genetic compensation for cilia defects in cep290 mutants by upregulation of cilia-associated small GTPases.

Magdalena Cardenas-Rodriguez, Christina Austin-Tse, Judith G M Bergboer, Elisa Molinari, Yuya Sugano, Ruxandra Bachmann-Gagescu, John A Sayer, Iain A Drummond

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. PSKH1 kinase activity is differentially modulated via allosteric binding of CaProceedings of the National Academy of Sciences of the United States of America · 2025
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  5. Follistatin like-1 (Adipocyte · 2024
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  6. Review
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  8. Review
  9. Model organisms for functional validation in genetic renal disease.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Zebrafish models of inherited retinal dystrophies.Journal of translational genetics and genomics · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 5 countries.

Magdalena Cardenas-RodriguezDepartment of Medicine, Nephrology Division, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, USA.
Christina Austin-TseDepartment of Pathology, Massachusetts General Hospital, 185 Cambridge St, Boston, MA 02114, USA.
Judith G M BergboerCergentis BV, Yalelaan 62, 3584 CM Utrecht, The Netherlands.
Elisa MolinariTranslational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle NE1 3BZ, UK.
Yuya SuganoInstitute of Anatomy, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
Ruxandra Bachmann-GagescuInstitute of Medical Genetics, University of Zurich Wagistrasse 12, CH-8952 Schlieren, Switzerland.
John A SayerTranslational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle NE1 3BZ, UK.
Iain A DrummondDepartment of Medicine, Nephrology Division, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, USA.ORCID 0000-0003-3734-1231
Massachusetts General Hospital · USUniversity of Zurich · CHCergentis (Netherlands) · NLMount Desert Island Biological Laboratory · USNewcastle University · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GB

Funding

GENETIC ANALYSIS OF ZEBRAFISH KIDNEY DEVELOPMENTR01DK053093 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI DRUMMOND, IAIN A. · 1997 to 2018
$5.2M
Identifying pathways required for integration of kidney organoid and host epitheliaUC2DK126021 · NIDDK · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI DRUMMOND, IAIN A., MARCIANO, DENISE K · 2020 to 2024
$3.1M
Medical Research Council MC_PC_17168NIDDK NIH HHS R01 DK053093NIDDK NIH HHS UC2 DK126021Wellcome Trust 213473/Z/18/Z
6 · The paper itself

Abstract

Mutations in CEP290 (also known as NPHP6), a large multidomain coiled coil protein, are associated with multiple cilia-associated syndromes. Over 130 CEP290 mutations have been linked to a wide spectrum of human ciliopathies, raising the question of how mutations in a single gene cause different disease syndromes. In zebrafish, the expressivity of cep290 deficiencies were linked to the type of genetic ablation: acute cep290 morpholino knockdown caused severe cilia-related phenotypes, whereas deficiencies in a CRISPR/Cas9 genetic mutant were restricted to photoreceptor defects. Here, we show that milder phenotypes in genetic mutants were associated with the upregulation of genes encoding the cilia-associated small GTPases arl3, arl13b and unc119b. Upregulation of UNC119b was also observed in urine-derived renal epithelial cells from human Joubert syndrome CEP290 patients. Ectopic expression of arl3, arl13b and unc119b in cep290 morphant zebrafish embryos rescued Kupffer's vesicle cilia and partially rescued photoreceptor outer segment defects. The results suggest that genetic compensation by upregulation of genes involved in a common subcellular process, lipidated protein trafficking to cilia, may be a conserved mechanism contributing to genotype-phenotype variations observed in CEP290 deficiencies. This article has an associated First Person interview with the first author of the paper.

Indexed as

Antigens, NeoplasmCell Cycle ProteinsCiliaCytoskeletal ProteinsMonomeric GTP-Binding ProteinsAdaptor Proteins, Signal TransducingAnimalsHumansMicrotubule-Associated ProteinsMutationUp-RegulationZebrafishZebrafish ProteinsAdaptor Proteins, Signal TransducingAntigens, NeoplasmCell Cycle ProteinsCep290 protein, humanCEP290 protein, zebrafishCytoskeletal ProteinsMicrotubule-Associated ProteinsMonomeric GTP-Binding ProteinsUNC119 protein, humanZebrafish ProteinsCep290CiliopathyGenetic compensationKidney epithelial cellNPHP6Zebrafish

Identifiers

PMID34155518
PMCPMC8325957
OpenAlexW3173325423

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.