Evidence map›Paper›PMID 34155382›Full record

ArticleNature cell biology2021

Mechanical compartmentalization of the intestinal organoid enables crypt folding and collective cell migration.

Carlos Pérez-González, Gerardo Ceada, Francesco Greco, Marija Matejčić, Manuel Gómez-González, Natalia Castro, Anghara Menendez, Sohan Kale, Denis Krndija, Andrew G Clark and 7 more

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Nature cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed, 1 pooled it
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 1 synthesis or guideline pooled it, 220 citations in OpenAlex.

  1. Pooled it
  2. Mechanical forces stimulate Golgi export.The Journal of cell biology · 2026
    Article
  3. Article
  4. Review
  5. Biophysics of lumen morphogenesis.Development (Cambridge, England) · 2026
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Mechanomedicine.Nature reviews bioengineering · 2026
    Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Review
  20. Review

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 3 countries.

Carlos Pérez-González *Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.
Gerardo Ceada *Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.ORCID http://orcid.org/0000-0002-0524-4018
Francesco GrecoLaCàN, Universitat Politècnica de Catalunya-BarcelonaTech, Barcelona, Spain.
Marija MatejčićInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.
Manuel Gómez-GonzálezInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.ORCID http://orcid.org/0000-0002-5091-0411
Natalia CastroInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.
Anghara MenendezInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.
Sohan KaleLaCàN, Universitat Politècnica de Catalunya-BarcelonaTech, Barcelona, Spain.
Denis KrndijaInstitut Curie, PSL Research University, CNRS UMR, Paris, France.
Andrew G ClarkInstitut Curie, PSL Research University, CNRS UMR, Paris, France.ORCID http://orcid.org/0000-0003-3712-4931
Venkata Ram GannavarapuInstitut Curie, PSL Research University, CNRS UMR, Paris, France.
Adrián Álvarez-VarelaInstitute for Research in Biomedicine (IRB Barcelona), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Pere Roca-CusachsInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain.ORCID http://orcid.org/0000-0001-6947-961X
Eduard BatlleInstitute for Research in Biomedicine (IRB Barcelona), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Danijela Matic VignjevicInstitut Curie, PSL Research University, CNRS UMR, Paris, France. danijela.vignjevic@curie.fr.ORCID http://orcid.org/0000-0003-4250-703X
Marino ArroyoInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain. marino.arroyo@upc.edu.ORCID http://orcid.org/0000-0003-1647-940X
Xavier TrepatInstitute for Bioengineering of Catalonia (IBEC), The Barcelona Institute for Science and Technology (BIST), Barcelona, Spain. xtrepat@ibecbarcelona.eu.ORCID http://orcid.org/0000-0002-7621-5214
Barcelona Institute of Science and Technology · ESCentre National de la Recherche Scientifique · FRInstitució Catalana de Recerca i Estudis Avançats · ESInstitute for Research in Biomedicine · ESInternational Center for Numerical Methods in Engineering · ESUniversitat Politècnica de Catalunya · ESVirginia Tech · US

Funding

European Research Council 681434European Research Council 772487European Research Council 883739
6 · The paper itself

Abstract

Intestinal organoids capture essential features of the intestinal epithelium such as crypt folding, cellular compartmentalization and collective movements. Each of these processes and their coordination require patterned forces that are at present unknown. Here we map three-dimensional cellular forces in mouse intestinal organoids grown on soft hydrogels. We show that these organoids exhibit a non-monotonic stress distribution that defines mechanical and functional compartments. The stem cell compartment pushes the extracellular matrix and folds through apical constriction, whereas the transit amplifying zone pulls the extracellular matrix and elongates through basal constriction. The size of the stem cell compartment depends on the extracellular-matrix stiffness and endogenous cellular forces. Computational modelling reveals that crypt shape and force distribution rely on cell surface tensions following cortical actomyosin density. Finally, cells are pulled out of the crypt along a gradient of increasing tension. Our study unveils how patterned forces enable compartmentalization, folding and collective migration in the intestinal epithelium.

Indexed as

Cell MovementMechanotransduction, CellularAnimalsCell CommunicationCell-Matrix JunctionsCells, CulturedComputer SimulationEpithelial CellsFemaleIntestinal MucosaMaleMice, TransgenicMicroscopy, ConfocalModels, BiologicalOrganoidsStress, Mechanical

Identifiers

PMID34155382
PMCPMC7611697
OpenAlexW3174575177

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.