Evidence map›Paper›PMID 34155381›Full record

ArticleNature cell biology2021

Cell fate coordinates mechano-osmotic forces in intestinal crypt formation.

Qiutan Yang, Shi-Lei Xue, Chii Jou Chan, Markus Rempfler, Dario Vischi, Francisca Maurer-Gutierrez, Takashi Hiiragi, Edouard Hannezo, Prisca Liberali

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Nature cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
11.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 163 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Biophysics of lumen morphogenesis.Development (Cambridge, England) · 2026
    Review
  9. Article
  10. New developments and applications of human organoids.Nature reviews. Molecular cell biology · 2026
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Science advances · 2025
    Article
  18. Article
  19. Article
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 4 countries.

Qiutan Yang *Friedrich Miescher Institute for Biomedical Research (FMI), Basel, Switzerland. qiutan.yang@fmi.ch.ORCID http://orcid.org/0000-0003-3963-891X
Shi-Lei Xue *Institute of Science and Technology Austria, Klosterneuburg, Austria.
Chii Jou ChanMechanobiology Institute, National University of Singapore, Singapore, Singapore.
Markus RempflerFriedrich Miescher Institute for Biomedical Research (FMI), Basel, Switzerland.
Dario VischiFriedrich Miescher Institute for Biomedical Research (FMI), Basel, Switzerland.
Francisca Maurer-GutierrezFriedrich Miescher Institute for Biomedical Research (FMI), Basel, Switzerland.
Takashi HiiragiEuropean Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-4964-7203
Edouard HannezoInstitute of Science and Technology Austria, Klosterneuburg, Austria. edouard.hannezo@ist.ac.at.ORCID http://orcid.org/0000-0001-6005-1561
Prisca LiberaliFriedrich Miescher Institute for Biomedical Research (FMI), Basel, Switzerland. prisca.liberali@fmi.ch.ORCID http://orcid.org/0000-0003-0695-6081
Friedrich Miescher Institute · CHInstitute of Science and Technology Austria · ATEuropean Molecular Biology Laboratory · DEFriedrich Miescher Institute · CHNational University of Singapore · SGUniversity of Basel · CH

Funding

European Research Council 758617Swiss National Science Foundation 157531
6 · The paper itself

Abstract

Intestinal organoids derived from single cells undergo complex crypt-villus patterning and morphogenesis. However, the nature and coordination of the underlying forces remains poorly characterized. Here, using light-sheet microscopy and large-scale imaging quantification, we demonstrate that crypt formation coincides with a stark reduction in lumen volume. We develop a 3D biophysical model to computationally screen different mechanical scenarios of crypt morphogenesis. Combining this with live-imaging data and multiple mechanical perturbations, we show that actomyosin-driven crypt apical contraction and villus basal tension work synergistically with lumen volume reduction to drive crypt morphogenesis, and demonstrate the existence of a critical point in differential tensions above which crypt morphology becomes robust to volume changes. Finally, we identified a sodium/glucose cotransporter that is specific to differentiated enterocytes that modulates lumen volume reduction through cell swelling in the villus region. Together, our study uncovers the cellular basis of how cell fate modulates osmotic and actomyosin forces to coordinate robust morphogenesis.

Indexed as

Cell DifferentiationCell LineageMechanotransduction, CellularOsmoregulationAnimalsCell MovementCells, CulturedComputer SimulationFemaleIntestinal MucosaMaleMiceMice, Inbred C57BLMice, TransgenicMicroscopy, ConfocalMicroscopy, VideoMyosin Type IISodium-Glucose Transport Proteins

Identifiers

PMID34155381
PMCPMC7611267
OpenAlexW3175754720

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.