Evidence map›Paper›PMID 34155352›Full record

ArticleThe Journal of antibiotics2021

Media and strain studies for the scaled production of cis-enone resorcylic acid lactones as feedstocks for semisynthesis.

Zeinab Y Al Subeh, Huzefa A Raja, Jennifer C Obike, Cedric J Pearce, Mitchell P Croatt, Nicholas H Oberlies

Open access · hybridAbstract read
In one paragraph

Article in The Journal of antibiotics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Zeinab Y Al SubehDepartment of Chemistry and Biochemistry, The University of North Carolina at Greensboro, Greensboro, NC, USA.ORCID http://orcid.org/0000-0001-9051-4969
Huzefa A RajaDepartment of Chemistry and Biochemistry, The University of North Carolina at Greensboro, Greensboro, NC, USA.
Jennifer C ObikeDepartment of Chemistry and Biochemistry, The University of North Carolina at Greensboro, Greensboro, NC, USA.
Cedric J PearceMycosynthetix, Inc., Hillsborough, NC, USA.ORCID http://orcid.org/0000-0002-0212-1127
Mitchell P CroattDepartment of Chemistry and Biochemistry, The University of North Carolina at Greensboro, Greensboro, NC, USA.
Nicholas H OberliesDepartment of Chemistry and Biochemistry, The University of North Carolina at Greensboro, Greensboro, NC, USA. nicholas_oberlies@uncg.edu.ORCID http://orcid.org/0000-0002-0354-8464
University of North Carolina at Greensboro · USMycosynthetix (United States) · US

Funding

Project 3:Isolation Chemistry of Filamentous Fungi and Biological EvaluationP01CA125066 · NCI · OHIO STATE UNIVERSITY · PI JIMMY ORJALA · 2007 to 2026
$27.2M
UNC Greensboro MARC USTAR Engage, Sustain, and PrepareT34GM113860 · NIGMS · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI GRAVES, JOSEPH LEWIS, HERR, DANIEL J · 2017 to 2021
$1.4M
TAK1 Inhibition by (5Z)-7-Oxozeaenol Analogues for Anticancer LeadsR15CA246491 · NCI · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI CROATT, MITCHELL PETER · 2020 to 2020
$405k
NCI NIH HHS P01 CA125066NCI NIH HHS R15 CA246491NIGMS NIH HHS T34 GM113860
6 · The paper itself

Abstract

Resorcylic acid lactones (RALs) with a cis-enone moiety, represented by hypothemycin (1) and (5Z)-7-oxozeaenol (2), are fungal secondary metabolites with irreversible inhibitory activity against protein kinases, with particularly selective activity for inhibition of TAK1 (transforming growth factor beta-activated kinase 1). Gram-scale quantities of these compounds were needed as feedstock for semi-synthesizing RAL-analogues in a step-economical fashion. To do so, this study had three primary goals: identifying fungi that biosynthesized 1 and 2, enhancing their production by optimizing the fermentation conditions on the lab scale, and developing straight forward purification processes. After evaluating 536 fungal extracts via an in-house dereplication protocol, three strains were identified as producing cis-enone RALs (i.e., MSX78495, MSX63935, MSX45109). Screening these fungal strains on three grain-based media revealed enhanced production of 1 by strain MSX78495 on oatmeal medium, while rice medium increased the biosynthesis of 2 by strain MSX63935. Furthermore, the purification processes were improved, moving away from HPLC purification to utilizing two to four cycles of resuspension and centrifugation in small volumes of organic solvents, generating gram-scale quantities of these metabolites readily. In addition, studying the chemistry profiles of strains MSX78495 and MSX63935 resulted in the isolation of ten other RALs (3-12), two radicinin analogues (13-14), and six benzopyranones (15-20), with 19 and 20 being newly described chlorinated benzopyranones.

Indexed as

Anti-Bacterial AgentsChromatography, High Pressure LiquidCulture MediaFermentationFungiLactonesMAP Kinase Kinase Kinase 7MAP Kinase Kinase KinasesMolecular ConformationProtein Kinase InhibitorsResorcinolsStereoisomerismStructure-Activity RelationshipZearalenone7-oxozeanolAnti-Bacterial AgentsCulture MediahypothemycinLactonesMAP Kinase Kinase Kinase 7MAP Kinase Kinase KinasesProtein Kinase InhibitorsResorcinolsZearalenone

Identifiers

PMID34155352
PMCPMC8313427
OpenAlexW3175778091

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.