Evidence map›Paper›PMID 34155333›Full record

ArticleThe ISME journal2021

Metabolic adaption to extracellular pyruvate triggers biofilm formation in Clostridioides difficile.

Yannick D N Tremblay, Benjamin A R Durand, Audrey Hamiot, Isabelle Martin-Verstraete, Marine Oberkampf, Marc Monot, Bruno Dupuy

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. mSphere · 2024
    Article
  8. Article
  9. Clostridioides difficile Biofilm.Advances in experimental medicine and biology · 2024
    Article
  10. Article
  11. Review
  12. Butyrate enhancesJournal of bacteriology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Wolf in Sheep's Clothing:Microorganisms · 2021
    Review
  18. Production ofFrontiers in cellular and infection microbiology · 2021
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yannick D N TremblayLaboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, UMR-CNRS 2001, Université de Paris, Paris, France. yannick.tremblay@usask.ca.ORCID http://orcid.org/0000-0001-8715-5571
Benjamin A R DurandLaboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, UMR-CNRS 2001, Université de Paris, Paris, France.ORCID http://orcid.org/0000-0003-0193-1205
Audrey HamiotLaboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, UMR-CNRS 2001, Université de Paris, Paris, France.
Isabelle Martin-VerstraeteLaboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, UMR-CNRS 2001, Université de Paris, Paris, France.
Marine OberkampfLaboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, UMR-CNRS 2001, Université de Paris, Paris, France.
Marc MonotPlateforme technologique Biomics, Institut Pasteur, Paris, France.ORCID http://orcid.org/0000-0003-0738-7335
Bruno DupuyLaboratoire Pathogenèse des Bactéries Anaérobies, Institut Pasteur, UMR-CNRS 2001, Université de Paris, Paris, France. bruno.dupuy@pasteur.fr.ORCID http://orcid.org/0000-0001-7176-8453
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clostridioides difficile infections are associated with gut microbiome dysbiosis and are the leading cause of hospital-acquired diarrhoea. The infectious process is strongly influenced by the microbiota and successful infection relies on the absence of specific microbiota-produced metabolites. Deoxycholate and short-chain fatty acids are microbiota-produced metabolites that limit the growth of C. difficile and protect the host against this infection. In a previous study, we showed that deoxycholate causes C. difficile to form strongly adherent biofilms after 48 h. Here, our objectives were to identify and characterize key molecules and events required for biofilm formation in the presence of deoxycholate. We applied time-course transcriptomics and genetics to identify sigma factors, metabolic processes and type IV pili that drive biofilm formation. These analyses revealed that extracellular pyruvate induces biofilm formation in the presence of deoxycholate. In the absence of deoxycholate, pyruvate supplementation was sufficient to induce biofilm formation in a process that was dependent on pyruvate uptake by the membrane protein CstA. In the context of the human gut, microbiota-generated pyruvate is a metabolite that limits pathogen colonization. Taken together our results suggest that pyruvate-induced biofilm formation might act as a key process driving C. difficile persistence in the gut.

Indexed as

Clostridioides difficileClostridium InfectionsBiofilmsClostridioidesHumansPyruvic AcidPyruvic Acid

Identifiers

PMID34155333
PMCPMC8630010
OpenAlexW3176000363

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.