Evidence map›Paper›PMID 34153076›Full record

ArticlePloS one2021

Deep learning for classification of pediatric chest radiographs by WHO's standardized methodology.

Yiyun Chen, Craig S Roberts, Wanmei Ou, Tanaz Petigara, Gregory V Goldmacher, Nicholas Fancourt, Maria Deloria Knoll

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In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yiyun ChenMerck & Co., Inc., Kenilworth, New Jersey, United States of America.ORCID 0000-0001-9239-5721
Craig S RobertsMerck & Co., Inc., Kenilworth, New Jersey, United States of America.
Wanmei OuMerck & Co., Inc., Kenilworth, New Jersey, United States of America.
Tanaz PetigaraMerck & Co., Inc., Kenilworth, New Jersey, United States of America.
Gregory V GoldmacherMerck & Co., Inc., Kenilworth, New Jersey, United States of America.
Nicholas FancourtMenzies School of Health Research, Charles Darwin University, Darwin, Australia.
Maria Deloria KnollDepartment of International Health, International Vaccine Access Center, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, United States of America.ORCID 0000-0001-9041-2671

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe World Health Organization (WHO)-defined radiological pneumonia is a preferred endpoint in pneumococcal vaccine efficacy and effectiveness studies in children. Automating the WHO methodology may support more widespread application of this endpoint.

methodsWe trained a deep learning model to classify pneumonia CXRs in children using the World Health Organization (WHO)'s standardized methodology. The model was pretrained on CheXpert, a dataset containing 224,316 adult CXRs, and fine-tuned on PERCH, a pediatric dataset containing 4,172 CXRs. The model was then tested on two pediatric CXR datasets released by WHO. We also compared the model's performance to that of radiologists and pediatricians.

resultsThe average area under the receiver operating characteristic curve (AUC) for primary endpoint pneumonia (PEP) across 10-fold validation of PERCH images was 0.928; average AUC after testing on WHO images was 0.977. The model's classification performance was better on test images with high inter-observer agreement; however, the model still outperformed human assessments in AUC and precision-recall spaces on low agreement images.

conclusionA deep learning model can classify pneumonia CXR images in children at a performance comparable to human readers. Our method lays a strong foundation for the potential inclusion of computer-aided readings of pediatric CXRs in vaccine trials and epidemiology studies.

Indexed as

Deep LearningDatasets as TopicFemaleHumansImage Interpretation, Computer-AssistedInfantMaleModels, StatisticalObserver VariationPneumoniaRadiography, ThoracicReproducibility of ResultsROC CurveWorld Health Organization

Identifiers

PMID34153076
PMCPMC8216551

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.