Evidence map›Paper›PMID 34153031›Full record

ArticlePLoS genetics2021

Vibrio cholerae's mysterious Seventh Pandemic island (VSP-II) encodes novel Zur-regulated zinc starvation genes involved in chemotaxis and cell congregation.

Shannon G Murphy, Brianna A Johnson, Camille M Ledoux, Tobias Dörr

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Distinct PlzC mechanisms integrate chemotaxis and c-di-GMP signaling to regulateProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. mBio · 2025
    Article
  6. Defence systems encoded by core genomic islands of seventh pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  7. A single point mutation is sufficient to driveJournal of bacteriology · 2025
    Article
  8. Microbial genomics · 2025
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Activation of amBio · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Cholera Dynamics and the Emergence of Pandemic Vibrio cholerae.Advances in experimental medicine and biology · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shannon G MurphyWeill Institute for Cell and Molecular Biology, Cornell University, Ithaca, New York, United States of America.ORCID 0000-0003-4544-1400
Brianna A JohnsonWeill Institute for Cell and Molecular Biology, Cornell University, Ithaca, New York, United States of America.ORCID 0000-0003-3214-284X
Camille M LedouxWeill Institute for Cell and Molecular Biology, Cornell University, Ithaca, New York, United States of America.ORCID 0000-0001-6164-4406
Tobias DörrWeill Institute for Cell and Molecular Biology, Cornell University, Ithaca, New York, United States of America.
Cornell University · US

Funding

The mechanism of autolysin regulation in Vibrio choleraeR01GM130971 · NIGMS · CORNELL UNIVERSITY · PI DOERR, TOBIAS · 2019 to 2025
$2.0M
NIGMS NIH HHS R01 GM130971
6 · The paper itself

Abstract

Vibrio cholerae is the causative agent of cholera, a notorious diarrheal disease that is typically transmitted via contaminated drinking water. The current pandemic agent, the El Tor biotype, has undergone several genetic changes that include horizontal acquisition of two genomic islands (VSP-I and VSP-II). VSP presence strongly correlates with pandemicity; however, the contribution of these islands to V. cholerae's life cycle, particularly the 26-kb VSP-II, remains poorly understood. VSP-II-encoded genes are not expressed under standard laboratory conditions, suggesting that their induction requires an unknown signal from the host or environment. One signal that bacteria encounter under both host and environmental conditions is metal limitation. While studying V. cholerae's zinc-starvation response in vitro, we noticed that a mutant constitutively expressing zinc starvation genes (Δzur) congregates at the bottom of a culture tube when grown in a nutrient-poor medium. Using transposon mutagenesis, we found that flagellar motility, chemotaxis, and VSP-II encoded genes were required for congregation. The VSP-II genes encode an AraC-like transcriptional activator (VerA) and a methyl-accepting chemotaxis protein (AerB). Using RNA-seq and lacZ transcriptional reporters, we show that VerA is a novel Zur target and an activator of the nearby AerB chemoreceptor. AerB interfaces with the chemotaxis system to drive oxygen-dependent congregation and energy taxis. Importantly, this work suggests a functional link between VSP-II, zinc-starved environments, and energy taxis, yielding insights into the role of VSP-II in a metal-limited host or aquatic reservoir.

Indexed as

Gene Expression Regulation, BacterialGenomic IslandsBacterial AdhesionBacterial ProteinsChemotaxisCholeraDNA-Binding ProteinsGenes, ReporterGenome, BacterialHumansLac OperonOxygenPandemicsRepressor ProteinsTranscription, GeneticVibrio choleraeBacterial ProteinsDNA-Binding ProteinsOxygenRepressor ProteinsZinc

Identifiers

PMID34153031
PMCPMC8248653
OpenAlexW3173486958

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.