Evidence map›Paper›PMID 34152157›Full record

ArticlePhysical review letters2021

Interphase Chromatin Undergoes a Local Sol-Gel Transition upon Cell Differentiation.

Iraj Eshghi, Jonah A Eaton, Alexandra Zidovska

Abstract read
In one paragraph

Article in Physical review letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Article
  3. Active processes shape and move the genome and nucleoplasm.Current opinion in genetics & development · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Bridging spatial and temporal scales of developmental gene regulation.Current opinion in genetics & development · 2025
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Iraj EshghiCenter for Soft Matter Research, Department of Physics, New York University, New York, New York 10003, USA.
Jonah A EatonCenter for Soft Matter Research, Department of Physics, New York University, New York, New York 10003, USA.
Alexandra ZidovskaCenter for Soft Matter Research, Department of Physics, New York University, New York, New York 10003, USA.

Funding

Mechanism and Function of Chromatin Positional Dynamics in InterphaseR00GM104152 · NIGMS · NEW YORK UNIVERSITY · PI ZIDOVSKA, ALEXANDRA · 2014 to 2016
$747k
NIGMS NIH HHS R00 GM104152
6 · The paper itself

Abstract

Cell differentiation, the process by which stem cells become specialized cells, is associated with chromatin reorganization inside the cell nucleus. Here, we measure the chromatin distribution and dynamics in embryonic stem cells in vivo before and after differentiation. We find that undifferentiated chromatin is less compact, more homogeneous, and more dynamic than differentiated chromatin. Furthermore, we present a noninvasive rheological analysis using intrinsic chromatin dynamics, which reveals that undifferentiated chromatin behaves like a Maxwell fluid, while differentiated chromatin shows a coexistence of fluidlike (sol) and solidlike (gel) phases. Our data suggest that chromatin undergoes a local sol-gel transition upon cell differentiation, corresponding to the formation of the more dense and transcriptionally inactive heterochromatin.

Indexed as

Models, BiologicalCell DifferentiationChromatinEmbryonic Stem CellsGreen Fluorescent ProteinsHistonesHumansInterphasePhase TransitionRheologyChromatinGreen Fluorescent ProteinsHistones

Identifiers

PMID34152157
PMCPMC8405102

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.