Evidence map›Paper›PMID 34148860›Full record

ArticleHematology, transfusion and cell therapy

Zika virus RNA detection in blood donors in São Paulo, Brazil.

Sanny Marcele da Costa Lira, Jose Eduardo Levi, Carolina Bonet Bub, Maria Giselda Aravecchia, Silvia Nunez Altman, Araci Massami Sakashita, Jose Mauro Kutner

Open access · diamondAbstract read
In one paragraph

Article in Hematology, transfusion and cell therapy. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Sanny Marcele da Costa LiraInstituto de Medicina Tropical, Universidade de São Paulo Instituto de Medicina Tropical de São Paulo (IMTSP USP), São Paulo, SP, Brazil. Electronic address: sannymarcele@hotmail.com.
Jose Eduardo LeviInstituto de Medicina Tropical, Universidade de São Paulo Instituto de Medicina Tropical de São Paulo (IMTSP USP), São Paulo, SP, Brazil.
Carolina Bonet BubHospital Israelita Albert Einstein (HIAE), São Paulo, SP, Brazil.
Maria Giselda AravecchiaHospital Israelita Albert Einstein (HIAE), São Paulo, SP, Brazil.
Silvia Nunez AltmanHospital Israelita Albert Einstein (HIAE), São Paulo, SP, Brazil.
Araci Massami SakashitaHospital Israelita Albert Einstein (HIAE), São Paulo, SP, Brazil.
Jose Mauro KutnerHospital Israelita Albert Einstein (HIAE), São Paulo, SP, Brazil.
Hospital Israelita Albert Einstein · BRUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe Zika Virus (ZIKV) is a single-stranded RNA genome virus, belonging to the family Flaviviridae, genus Flavivirus. Outbreaks around the world have demonstrated that the presence of asymptomatic viremic blood donors provides an increase in the risk of transfusion transmission (TT) and nucleic acid test (NAT) screening has been proposed to ensure the blood safety. This study implemented an "in-house" method to detect ZIKV RNA in blood sample donations.

methodsPrimary plasma tubes are submitted to nucleic acid extraction on an automated platform. After extraction, the NAT set-up is performed in the robotic pipettor, in which an amplification mixture containing primers and probes for ZIKV and Polio vaccine virus (PV) are added in duplex as an internal control. The real-time polymerase chain reaction is then performed in a thermocycler, using the protocol established by the supplier.

resultsFrom May 2016 to May 2018, 3,369 samples were collected from 3,221 blood donors (confidence coefficient 95%), of which 31 were considered false positive (0.92%), as they did not confirm initial reactivity when repeated in duplicates and 14 (0.42%) had their results invalid due to repeat failure in the internal control, 4 (0.12%), due to insufficient sample volume and 2 (0.05%), due to automatic pipettor failures. No Zika RNA reactive sample was identified.

conclusionThe test showed feasible to be incorporated into the blood screening routine. Our data do not indicate the need to screen for ZIKV RNA in São Paulo during the evaluated period. However, a generic NAT system covering a group of flaviviruses which are circulating in the region, such as DENV and YFV, among others, could be a useful tool.

Indexed as

Blood donorsBlood transfusionFlavivirusReal-time polymerase chain reactionZika virus

Identifiers

PMID34148860
PMCPMC9605902
OpenAlexW3165368122

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.