Evidence map›Paper›PMID 34147088›Full record

ArticleBMC plant biology2021

Expressional diversity of grapevine 3-Hydroxy-3-methylglutaryl-CoA reductase (VvHMGR) in different grapes genotypes.

Ting Zheng, Lubin Guan, Kun Yu, Muhammad Salman Haider, Maazullah Nasim, Zhongjie Liu, Teng Li, Kekun Zhang, Songtao Jiu, Haifeng Jia and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

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  13. Genome-Wide Comparison and Functional Characterization ofInternational journal of molecular sciences · 2023
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  14. Article
  15. Review
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  17. Article
  18. Article
  19. Frontiers in plant science · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Ting ZhengCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China.
Lubin GuanCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China.
Kun YuCollege of Agriculture, Shihezi University, Shihezi City, 832003, PR China.
Muhammad Salman HaiderCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China.
Maazullah NasimCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China.
Zhongjie LiuCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China.
Teng LiCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China.
Kekun ZhangCollege of Enology, Northwest A&F University, Yangling, 712100, PR China.
Songtao JiuDepartment of Plant Science, Shanghai Jiao Tong University, 200030, Shanghai, PR China.
Haifeng JiaCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China. jiahaifeng@njau.edu.cn.
Jinggui FangCollege of Horticulture, Nanjing Agricultural University, Jiangsu Province, Nanjing City, 210095, PR China. fanggg@njau.edu.cn.
Nanjing Agricultural University · CNNorthwest A&F University · CNShanghai Jiao Tong University · CNShihezi University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background3-Hydroxy-3-methylglutaryl-CoA reductase (HMGR) is a key enzyme in the mevalonate (MVA) pathway, which regulates the metabolism of terpenoids in the cytoplasm and determines the type and content of downstream terpenoid metabolites.

resultsResults showed that grapevine HMGR family has three members, such as VvHMGR1, VvHMGR2, and VvHMGR3. The expression of VvHMGRs in 'Kyoho' has tissue specificity, for example, VvHMGR1 keeps a higher expression, VvHMGR2 is the lowest, and VvHMGR3 gradually decreases as the fruit development. VvHMGR3 is closely related to CsHMGR1 and GmHMGR9 and has collinearity with CsHMGR2 and GmHMGR4. By the prediction of interaction protein, it can interact with HMG-CoA synthase, MVA kinase, FPP/GGPP synthase, diphosphate mevalonate decarboxylase, and participates in the synthesis and metabolism of terpenoids. VvHMGR3 have similar trends in expression with some of the genes of carotenoid biosynthesis and MEP pathways. VvHMGR3 responds to various environmental and phytohormone stimuli, especially salt stress and ultraviolet (UV) treatment. The expression level of VvHMGRs is diverse in grapes of different colors and aroma. VvHMGRs are significantly higher in yellow varieties than that in red varieties, whereas rose-scented varieties showed significantly higher expression than that of strawberry aroma. The expression level is highest in yellow rose-scented varieties, and the lowest in red strawberry scent varieties, especially 'Summer Black' and 'Fujiminori'.

conclusionThis study confirms the important role of VvHMGR3 in the process of grape fruit coloring and aroma formation, and provided a new idea to explain the loss of grape aroma and poor coloring during production. There may be an additive effect between color and aroma in the HMGR expression aspect.

Indexed as

Genes, PlantAnthocyaninsEvolution, MolecularFruitGene Expression ProfilingGenetic VariationGenotypeHydroxymethylglutaryl CoA ReductasesMultigene FamilyOsmotic PressurePlant Growth RegulatorsTerpenesVitisAnthocyaninsHydroxymethylglutaryl CoA ReductasesPlant Growth RegulatorsTerpenesAromaColorGrapeHMGRTerpenoids

Identifiers

PMID34147088
PMCPMC8214791
OpenAlexW3176352056

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.