Evidence map›Paper›PMID 34146438›Full record

ArticleMolecular microbiology2021

Selective nuclear export of mRNAs is promoted by DRBD18 in Trypanosoma brucei.

Amartya Mishra, Jan Naseer Kaur, Daniel I McSkimming, Eva Hegedűsová, Ashutosh P Dubey, Martin Ciganda, Zdeněk Paris, Laurie K Read

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  5. Life stage-specific poly(A) site selection regulated byProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Translational control byRNA (New York, N.Y.) · 2023
    Article
  7. Article
  8. Review
  9. TheRNA (New York, N.Y.) · 2022
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Amartya MishraJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Jan Naseer KaurJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Daniel I McSkimmingBioinformatics and Computational Biology Core, University of Southern Florida, Tampa, FL, USA.
Eva HegedűsováInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.
Ashutosh P DubeyJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Martin CigandaJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.
Zdeněk ParisInstitute of Parasitology, Biology Centre, Czech Academy of Sciences, České Budějovice (Budweis), Czech Republic.
Laurie K ReadJacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.ORCID 0000-0003-1235-6736
Jacobs (United States) · USInstitute of Parasitology · CZUniversity of South Bohemia in České Budějovice · CZUniversity of South Florida · US

Funding

Function and regulation of the essential RNA binding protein, DRBD18R01AI141557 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI READ, LAURIE K. · 2019 to 2023
$2.1M
NIAID NIH HHS R01 AI141557
6 · The paper itself

Abstract

Kinetoplastids, including Trypanosoma brucei, control gene expression primarily at the posttranscriptional level. Nuclear mRNA export is an important, but understudied, step in this process. The general heterodimeric export factors, Mex67/Mtr2, function in the export of mRNAs and tRNAs in T. brucei, but RNA binding proteins (RBPs) that regulate export processes by controlling the dynamics of Mex67/Mtr2 ribonucleoprotein formation or transport have not been identified. Here, we report that DRBD18, an essential and abundant T. brucei RBP, associates with Mex67/Mtr2 in vivo, likely through its direct interaction with Mtr2. DRBD18 downregulation results in partial accumulation of poly(A)

Indexed as

Active Transport, Cell NucleusGene Expression RegulationGene Knockdown TechniquesMembrane Transport ProteinsNucleocytoplasmic Transport ProteinsProtein BindingProtozoan ProteinsRNA-Binding ProteinsRNA, MessengerRNA, TransferRNA TransportTranscriptomeTrypanosoma brucei bruceiMembrane Transport ProteinsNucleocytoplasmic Transport ProteinsProtozoan ProteinsRNA-Binding ProteinsRNA, MessengerRNA, TransferFISHmRNA exportnucleoporinRNA binding proteinRNAseqtrypanosome

Identifiers

PMID34146438
PMCPMC8460611
OpenAlexW3168234554

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.