Evidence map›Paper›PMID 34143953›Full record

ArticleCell2021

Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading.

Liming Yan, Yunxiang Yang, Mingyu Li, Ying Zhang, Litao Zheng, Ji Ge, Yucen C Huang, Zhenyu Liu, Tao Wang, Shan Gao and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 151 citations in OpenAlex.

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42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Liming YanMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Yunxiang YangMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China; Tsinghua University-Peking University Joint Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, China.
Mingyu LiMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China.
Ying ZhangMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China.
Litao ZhengShanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China; School of Life Sciences, Tsinghua University, Beijing, China.
Ji GeSchool of Life Sciences, Tsinghua University, Beijing, China.
Yucen C HuangMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China.
Zhenyu LiuMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China.
Tao WangMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Shan GaoMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China.
Ran ZhangSchool of Life Sciences, Tsinghua University, Beijing, China.
Yuanyun Y HuangDivision of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA, USA.
Luke W GuddatSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia.
Yan GaoShanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China. Electronic address: yan-gao13@mails.tsinghua.edu.cn.
Zihe RaoMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China; Shanghai Institute for Advanced Immunochemical Studies and School of Life Science and Technology, ShanghaiTech University, Shanghai, China; School of Life Sciences, Tsinghua University, Beijing, China; State Key Laboratory of Medicinal Chemical Biology, College of Life Sciences and College of Pharmacy, Nankai University, Tianjin, China; National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; Guangzhou Laboratory, Guangzhou, China. Electronic address: raozh@tsinghua.edu.cn.
Zhiyong LouMOE Key Laboratory of Protein Science, School of Medicine, Tsinghua University, Beijing, China; Guangzhou Laboratory, Guangzhou, China. Electronic address: louzy@mail.tsinghua.edu.cn.
Tsinghua University · CNShanghaiTech University · CNCalifornia Institute of Technology · USChinese Academy of Sciences · CNPeking University · CNThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The capping of mRNA and the proofreading play essential roles in SARS-CoV-2 replication and transcription. Here, we present the cryo-EM structure of the SARS-CoV-2 replication-transcription complex (RTC) in a form identified as Cap(0)-RTC, which couples a co-transcriptional capping complex (CCC) composed of nsp12 NiRAN, nsp9, the bifunctional nsp14 possessing an N-terminal exoribonuclease (ExoN) and a C-terminal N7-methyltransferase (N7-MTase), and nsp10 as a cofactor of nsp14. Nsp9 and nsp12 NiRAN recruit nsp10/nsp14 into the Cap(0)-RTC, forming the N7-CCC to yield cap(0) (

Indexed as

Amino Acid SequenceCoronavirus RNA-Dependent RNA PolymeraseCOVID-19ExoribonucleasesHumansMethyltransferasesRNA, MessengerRNA, ViralSARS-CoV-2Sequence AlignmentTranscription, GeneticVirus ReplicationCoronavirus RNA-Dependent RNA PolymeraseExoribonucleasesMethyltransferasesNSP12 protein, SARS-CoV-2RNA, MessengerRNA, Viralcryo-EMmRNA cappingproofreadingreplication-transcription complexSARS-CoV-2

Identifiers

PMID34143953
PMCPMC8142856
OpenAlexW3165788001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.