Evidence map›Paper›PMID 34143280›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2021

Intraspecific variation in polar and nonpolar metabolite profiles of a threatened Caribbean coral.

Joseph A Henry, Ram B Khattri, Joy Guingab-Cagmat, Matthew E Merritt, Timothy J Garrett, Joshua T Patterson, Kathryn E Lohr

Abstract read
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In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Joseph A HenryProgram in Fisheries and Aquatic Sciences, School of Forest, Fisheries, and Geomatics Sciences, University of Florida/IFAS, 7922 NW 71st Street, Gainesville, FL, 32653, USA. henry8404@ufl.edu.ORCID 0000-0001-6843-2094
Ram B KhattriDepartment of Biochemistry and Molecular Biology, College of Medicine, University of Florida, Gainesville, FL, USA.ORCID 0000-0001-9991-263X
Joy Guingab-CagmatSoutheast Center for Integrated Metabolomics, Clinical and Translational Science Institute, University of Florida, Gainesville, FL, USA.
Matthew E MerrittDepartment of Biochemistry and Molecular Biology, College of Medicine, University of Florida, Gainesville, FL, USA.ORCID 0000-0003-4617-9651
Timothy J GarrettDepartment of Pathology, Immunology, and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL, USA.ORCID 0000-0003-1623-009X
Joshua T PattersonProgram in Fisheries and Aquatic Sciences, School of Forest, Fisheries, and Geomatics Sciences, University of Florida/IFAS, 7922 NW 71st Street, Gainesville, FL, 32653, USA.ORCID 0000-0002-0941-2154
Kathryn E LohrOffice of National Marine Sanctuaries, National Oceanic and Atmospheric Administration, Silver Spring, MD, USA.ORCID 0000-0002-3580-3431
University of Florida · USFlorida Aquarium · USNational Oceanic and Atmospheric Administration · US

Funding

Southeast Resource Center for Integrated Metabolomics (SECIM)U24DK097209 · NIDDK · UNIVERSITY OF FLORIDA · PI EDISON, ARTHUR S, YOST, RICHARD A. · 2013 to 2017
$9.2M
NIDDK NIH HHS U24 DK097209
6 · The paper itself

Abstract

introductionResearch aimed at understanding intraspecific variation among corals could substantially increase understanding of coral biology and improve outcomes of active restoration efforts. Metabolomics is useful for identifying physiological drivers leading to variation among genotypes and has the capacity to improve our selection of candidate corals that express phenotypes beneficial to restoration.

objectivesOur study aims to compare metabolomic profiles among known, unique genotypes of the threatened coral Acropora cervicornis. In doing so, we seek information related to the physiological characteristics driving variation among genotypes, which could aid in identifying genets with desirable traits for restoration.

methodsWe applied proton nuclear magnetic resonance (

resultsSignificant variation in polar and nonpolar metabolite profiles was found among A. cervicornis genotypes. Despite difficulties identifying all significant metabolites driving separation among genotypes, our data support previous findings and further suggest metabolomic profiles differ among various genotypes of the threatened species A. cervicornis.

conclusionThe implementation of metabolomic analyses allowed identification of several key metabolites driving separation among genotypes and expanded our understanding of the A. cervicornis metabolome. Although our research is specific to A. cervicornis, these findings have broad relevance for coral biology and active restoration. Furthermore, this study provides specific information on the understudied A. cervicornis metabolome and further confirmation that differences in metabolome structure could drive phenotypic variation among genotypes.

Indexed as

AnthozoaMetabolomicsAnimalsCaribbean RegionEndangered SpeciesGenotypeAcropora cervicornisCoral reefsCoral restorationLipidomicsMass spectrometryMetabolomics

Identifiers

PMID34143280
OpenAlexW3171548315

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.