Evidence map›Paper›PMID 34142127›Full record

ArticleDisease models & mechanisms2021

Saturation mutagenesis defines novel mouse models of severe spine deformity.

Jonathan J Rios, Kristin Denton, Hao Yu, Kandamurugu Manickam, Shannon Garner, Jamie Russell, Sara Ludwig, Jill A Rosenfeld, Pengfei Liu, Jake Munch and 3 more

Open access · goldAbstract read
In one paragraph

Article in Disease models & mechanisms, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. The biology of SCUBE.Journal of biomedical science · 2023
    Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Jonathan J RiosCenter for Pediatric Bone Biology and Translational Research, Scottish Rite for Children, Dallas, TX 75219, USA.ORCID 0000-0002-0969-2184
Kristin DentonCenter for Pediatric Bone Biology and Translational Research, Scottish Rite for Children, Dallas, TX 75219, USA.
Hao YuCenter for Pediatric Bone Biology and Translational Research, Scottish Rite for Children, Dallas, TX 75219, USA.
Kandamurugu ManickamDivision of Genetic and Genomic Medicine, Nationwide Children's Hospital, Columbus, OH 43205, USA.
Shannon GarnerDivision of Genetic and Genomic Medicine, Nationwide Children's Hospital, Columbus, OH 43205, USA.
Jamie RussellCenter for the Genetics of Host Defense, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Sara LudwigCenter for the Genetics of Host Defense, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jill A RosenfeldDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Pengfei LiuDepartment of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.ORCID 0000-0002-4177-709X
Jake MunchCenter for Pediatric Bone Biology and Translational Research, Scottish Rite for Children, Dallas, TX 75219, USA.
Daniel J SucatoDepartment of Orthopaedics, Scottish Rite for Children, Dallas, TX 75219, USA.
Bruce BeutlerCenter for the Genetics of Host Defense, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Carol A WiseCenter for Pediatric Bone Biology and Translational Research, Scottish Rite for Children, Dallas, TX 75219, USA.
Texas Scottish Rite Hospital for Children · USThe University of Texas Southwestern Medical Center · USBaylor College of Medicine · USNationwide Children's Hospital · US

Funding

Systems Biology CoreU19AI100627 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI NOLAN, GARRY P · 2012 to 2021
$49.1M
Automated Forward Genetic Analysis of Adaptive ImmunityR01AI125581 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI BRUCE A BEUTLER · 2016 to 2026
$19.5M
NIAID NIH HHS R01 AI125581NIAID NIH HHS U19 AI100627
6 · The paper itself

Abstract

Embryonic formation and patterning of the vertebrate spinal column requires coordination of many molecular cues. After birth, the integrity of the spine is impacted by developmental abnormalities of the skeletal, muscular and nervous systems, which may result in deformities, such as kyphosis and scoliosis. We sought to identify novel genetic mouse models of severe spine deformity by implementing in vivo skeletal radiography as part of a high-throughput saturation mutagenesis screen. We report selected examples of genetic mouse models following radiographic screening of 54,497 mice from 1275 pedigrees. An estimated 30.44% of autosomal genes harbored predicted damaging alleles examined twice or more in the homozygous state. Of the 1275 pedigrees screened, 7.4% presented with severe spine deformity developing in multiple mice, and of these, meiotic mapping implicated N-ethyl-N-nitrosourea alleles in 21% of pedigrees. Our study provides proof of concept that saturation mutagenesis is capable of discovering novel mouse models of human disease, including conditions with skeletal, neural and neuromuscular pathologies. Furthermore, we report a mouse model of skeletal disease, including severe spine deformity, caused by recessive mutation in Scube3. By integrating results with a human clinical exome database, we identified a patient with undiagnosed skeletal disease who harbored recessive mutations in SCUBE3, and we demonstrated that disease-associated mutations are associated with reduced transactivation of Smad signaling in vitro. All radiographic results and mouse models are made publicly available through the Mutagenetix online database with the goal of advancing understanding of spine development and discovering novel mouse models of human disease.

Indexed as

MutagenesisAnimalsCalcium-Binding ProteinsDisease Models, AnimalFemaleMaleMicePedigreeSeverity of Illness IndexSpineCalcium-Binding ProteinsSCUBE3 protein, humanENUKyphosisN-ethyl-N-nitrosoureaScoliosis

Identifiers

PMID34142127
PMCPMC8246263
OpenAlexW3165081340

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.