Evidence map›Paper›PMID 34142026›Full record

ArticleiScience2021

Microbiome-encoded bile acid metabolism modulates colonic transit times.

Naisi Li, Sean T Koester, Daniel M Lachance, Moumita Dutta, Julia Yue Cui, Neelendu Dey

Open access · goldAbstract read
In one paragraph

Article in iScience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

  1. Bile acid signaling in health and disease.Molecular biomedicine · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Inhibition of bile acid reabsorption as a treatment for constipation.Indian journal of gastroenterology : official journal of the Indian Society of Gastroenterology · 2025
    Article
  12. The Enteric Neuronal Circuitry: A Key Ignored Player in Nutrient Sensing Along the Gut-Brain Axis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Review
  13. Review
  14. Shaoyao Gancao decoction alleviates functional constipation by inhibitingFrontiers in cellular and infection microbiology · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Observational
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Naisi LiClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Sean T KoesterClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Daniel M LachanceClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Moumita DuttaDepartment of Environmental and Occupational Health Services, University of Washington, Seattle, WA, USA.
Julia Yue CuiDepartment of Environmental and Occupational Health Services, University of Washington, Seattle, WA, USA.
Neelendu DeyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
University of Washington · USFred Hutch Cancer Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Sheela Sathyanarayana · 1995 to 2026
$42.5M
The gut microbiota, bile acid-mediated enteric nervous system signaling, and modulation of gastrointestinal motilityK08DK111941 · NIDDK · WASHINGTON UNIVERSITY · PI DEY, NEELENDU · 2016 to 2020
$809k
NCI NIH HHS P30 CA015704NIDDK NIH HHS K08 DK111941NIEHS NIH HHS P30 ES007033
6 · The paper itself

Abstract

Gut motility is regulated by the microbiome via mechanisms that include bile acid metabolism. To localize the effects of microbiome-generated bile acids, we colonized gnotobiotic mice with different synthetic gut bacterial communities that were metabolically phenotyped using a functional

Indexed as

GastroenterologyMicrobiologyMicrobiome

Identifiers

PMID34142026
PMCPMC8188381
OpenAlexW3158359541

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.