Evidence map›Paper›PMID 34141066›Full record

ArticleACS medicinal chemistry letters2021

Remodelin Is a Cryptic Assay Interference Chemotype That Does Not Inhibit NAT10-Dependent Cytidine Acetylation.

Jonathan H Shrimp, Yihang Jing, Supuni Thalalla Gamage, Kathryn M Nelson, Joseph Han, Keri M Bryson, David C Montgomery, Justin M Thomas, Kellie D Nance, Sunny Sharma and 12 more

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 32 citations in OpenAlex.

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  18. Clinical and translational medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 3 countries.

Jonathan H ShrimpChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
Yihang JingChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
Supuni Thalalla GamageChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
Kathryn M NelsonUniversity of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0001-8274-2064
Joseph HanDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Keri M BrysonChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
David C MontgomeryChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
Justin M ThomasChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
Kellie D NanceChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.ORCID 0000-0002-4396-9124
Sunny SharmaDepartment of Cell Biology and Neuroscience, Rutgers University, Piscataway, New Jersey 08854, United States.ORCID 0000-0001-8896-9016
Stephen D FoxProtein Characterization Laboratory, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, Maryland 21702, United States.
Thorkell AndressenProtein Characterization Laboratory, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, Maryland 21702, United States.
Wilson R SinclairChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.
Hong WuStructural Genomics Consortium, Toronto, Ontario M5G 1L7, Canada.
Abdellah Allali-HassaniStructural Genomics Consortium, Toronto, Ontario M5G 1L7, Canada.
Guillermo SenisterraStructural Genomics Consortium, Toronto, Ontario M5G 1L7, Canada.
Masoud VedadiStructural Genomics Consortium, Toronto, Ontario M5G 1L7, Canada.
Denis LafontaineRNA Molecular Biology, Université Libre de Bruxelles, Fonds de la Recherche Scientifique (F.R.S./FNRS), 6041 Gosselies, Belgium.
Jayme L DahlinDepartment of Pathology, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts 02115, United States.ORCID 0000-0003-4151-9944
Ronen MarmorsteinDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Michael A WaltersUniversity of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0001-5650-9277
Jordan L MeierChemical Biology Laboratory, National Cancer Institute, Frederick, Maryland 21702, United States.ORCID 0000-0002-0537-7101
Frederick National Laboratory for Cancer Research · USStructural Genomics Consortium · CALeidos (United States) · USUniversity of Minnesota · USBrigham and Women's Hospital · USCancer Research Institute · USRutgers, The State University of New Jersey · USUniversité Libre de Bruxelles · BEUniversity of Pennsylvania · US

Funding

Targeting Cancer Through Modifications and MetabolismZIABC011488 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MEIER, JORDAN L · 2013 to 2025
$21.3M
VASCULAR, PULMONARY AND RENAL INJURYT32HL007627 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI GIMBRONE, MICHAEL A, MITCHELL, RICHARD N · 1985 to 2019
$12.7M
Molecular Mechanisms, Pathways and Inhibition of Acetyl-Transfer ReactionsR35GM118090 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Ronen Marmorstein · 2016 to 2026
$6.7M
CCR NIH HHS HHSN261200800001CIntramural NIH HHS ZIA BC011488NCI NIH HHS HHSN261200800001ENHLBI NIH HHS T32 HL007627NIGMS NIH HHS R35 GM118090Wellcome Trust
6 · The paper itself

Abstract

Remodelin is a putative small molecule inhibitor of the RNA acetyltransferase NAT10 which has shown preclinical efficacy in models of the premature aging disease Hutchinson-Gilford Progeria Syndrome (HGPS). Here we evaluate remodelin's assay interference characteristics and effects on NAT10-catalyzed RNA cytidine acetylation. We find the remodelin chemotype constitutes a cryptic assay interference compound, which does not react with small molecule thiols but demonstrates protein reactivity in ALARM NMR and proteome-wide affinity profiling assays. Biophysical analyses find no direct evidence for interaction of remodelin with the NAT10 acetyltransferase active site. Cellular studies verify that N4-acetylcytidine (ac4C) is a nonredundant target of NAT10 activity in human cell lines and find that this RNA modification is not affected by remodelin treatment in several orthogonal assays. These studies display the potential for remodelin's chemotype to interact with multiple protein targets in cells and indicate remodelin should not be applied as a specific chemical inhibitor of NAT10-catalyzed RNA acetylation.

Identifiers

PMID34141066
PMCPMC8201477
OpenAlexW3045182741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.