Evidence map›Paper›PMID 34140564›Full record

ArticleScientific reports2021

Extraordinary diversity of telomeres, telomerase RNAs and their template regions in Saccharomycetaceae.

Vratislav Peska, Petr Fajkus, Michal Bubeník, Václav Brázda, Natália Bohálová, Vojtěch Dvořáček, Jiří Fajkus, Sònia Garcia

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  5. Discovery of additional ancient genome duplications in yeasts.bioRxiv : the preprint server for biology · 2025
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  12. Article
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  14. Article
  15. Identification of the Sequence and the Length of Telomere DNA.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  16. Review
  17. Article
  18. Investigating the role of G-quadruplexes atMicrobial cell (Graz, Austria) · 2022
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Vratislav PeskaInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic. vpeska@ibp.cz.
Petr FajkusInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic.
Michal BubeníkInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic.
Václav BrázdaInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic.
Natália BohálováInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic.
Vojtěch DvořáčekInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic.
Jiří FajkusInstitute of Biophysics, Academy of Sciences of the Czech Republic, Brno, 61265, Czech Republic.
Sònia GarciaInstitut Botànic de Barcelona (IBB-CSIC, Ajuntament de Barcelona), Passeig del Migdia s/n, 08038, Barcelona, Catalonia, Spain. soniagarcia@ibb.csic.es.
Czech Academy of Sciences · CZCzech Academy of Sciences, Institute of Biophysics · CZAjuntament de Barcelona · ESCentral European Institute of Technology – Masaryk University · CZMasaryk University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Telomerase RNA (TR) carries the template for synthesis of telomere DNA and provides a scaffold for telomerase assembly. Fungal TRs are long and have been compared to higher eukaryotes, where they show considerable diversity within phylogenetically close groups. TRs of several Saccharomycetaceae were recently identified, however, many of these remained uncharacterised in the template region. Here we show that this is mainly due to high variability in telomere sequence. We predicted the telomere sequences using Tandem Repeats Finder and then we identified corresponding putative template regions in TR candidates. Remarkably long telomere units and the corresponding putative TRs were found in Tetrapisispora species. Notably, variable lengths of the annealing sequence of the template region (1-10 nt) were found. Consequently, species with the same telomere sequence may not harbour identical TR templates. Thus, TR sequence alone can be used to predict a template region and telomere sequence, but not to determine these exactly. A conserved feature of telomere sequences, tracts of adjacent Gs, led us to test the propensity of individual telomere sequences to form G4. The results show highly diverse values of G4-propensity, indicating the lack of ubiquitous conservation of this feature across Saccharomycetaceae.

Indexed as

Genetic VariationTemplates, GeneticBase SequenceBenzothiazolesFluorescenceG-QuadruplexesReproducibility of ResultsRNASaccharomycetalesTelomeraseTelomereBenzothiazolesRNATelomerasetelomerase RNAthioflavin T

Identifiers

PMID34140564
PMCPMC8211666
OpenAlexW3169099050

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.