Evidence map›Paper›PMID 34140486›Full record

ArticleNature communications2021

Dendritic calcium signals in rhesus macaque motor cortex drive an optical brain-computer interface.

Eric M Trautmann, Daniel J O'Shea, Xulu Sun, James H Marshel, Ailey Crow, Brian Hsueh, Sam Vesuna, Lucas Cofer, Gergő Bohner, Will Allen and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 69 citations in OpenAlex.

  1. Review
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  11. TWINKLE: An open-source two-photon microscope for teaching and research.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. NIMH perspectives on future directions in neuroimaging for mental health.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Auditory Corticofugal Neurons Transmit Auditory and Non-auditory Information During Behavior.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Eric M Trautmann *Neurosciences Graduate Program, Stanford University, Stanford, CA, USA. etrautmann@gmail.com.
Daniel J O'Shea *Neurosciences Graduate Program, Stanford University, Stanford, CA, USA. djoshea@gmail.com.ORCID http://orcid.org/0000-0002-1366-1743
Xulu Sun *Department of Biology, Stanford University, Stanford, CA, USA. xlsun79@gmail.com.ORCID http://orcid.org/0000-0003-3076-0994
James H MarshelDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Ailey CrowDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Brian HsuehNeurosciences Graduate Program, Stanford University, Stanford, CA, USA.
Sam VesunaDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Lucas CoferDepartment of Electrical Engineering, Stanford University, Stanford, CA, USA.
Gergő BohnerGatsby Computational Neuroscience Unit, University College London, London, UK.
Will AllenNeurosciences Graduate Program, Stanford University, Stanford, CA, USA.
Isaac KauvarNeurosciences Graduate Program, Stanford University, Stanford, CA, USA.
Sean QuirinDepartment of Bioengineering, Stanford University, Stanford, CA, USA.
Matthew MacDougallDepartment of Neurosurgery, Stanford University, Stanford, CA, USA.
Yuzhi ChenCenter for Perceptual Systems, University of Texas, Austin, TX, USA.
Matthew P WhitmireCenter for Perceptual Systems, University of Texas, Austin, TX, USA.
Charu RamakrishnanDepartment of Bioengineering, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-3474-6332
Maneesh SahaniGatsby Computational Neuroscience Unit, University College London, London, UK.ORCID http://orcid.org/0000-0001-5560-3341
Eyal SeidemannCenter for Perceptual Systems, University of Texas, Austin, TX, USA.ORCID http://orcid.org/0000-0002-4873-3882
Stephen I RyuDepartment of Electrical Engineering, Stanford University, Stanford, CA, USA.
Karl DeisserothNeurosciences Graduate Program, Stanford University, Stanford, CA, USA. deissero@stanford.edu.ORCID http://orcid.org/0000-0001-9440-3967
Krishna V ShenoyNeurosciences Graduate Program, Stanford University, Stanford, CA, USA. shenoy@stanford.edu.ORCID http://orcid.org/0000-0003-1534-9240
Stanford University · USThe University of Texas at Austin · USHoward Hughes Medical Institute · USOxford Centre for Computational Neuroscience · GBPalo Alto Institute · US

Funding

OPTICAL NEUROMODULATION TECHNOLOGY FOR LONG TIMESCALESR01MH086373 · NIMH · STANFORD UNIVERSITY · PI DEISSEROTH, KARL A. · 2010 to 2025
$9.1M
Linking Neural Population Activity and Visual PerceptionR01EY016454 · NEI · UNIVERSITY OF TEXAS AUSTIN · PI SEIDEMANN, EYAL J · 2005 to 2024
$6.6M
Toward an Animal Model of Freely Moving HumanDP1HD075623 · NICHD · STANFORD UNIVERSITY · PI SHENOY, KRISHNA V · 2012 to 2013
$1.6M
Optimal Feedback Control Mechanisms in Motor PreparationF31NS089376 · NINDS · STANFORD UNIVERSITY · PI TRAUTMANN, ERIC · 2014 to 2016
$102k
Howard Hughes Medical InstituteNEI NIH HHS R01 EY016454NICHD NIH HHS DP1 HD075623NIMH NIH HHS R01 MH086373NINDS NIH HHS F31 NS089376
6 · The paper itself

Abstract

Calcium imaging is a powerful tool for recording from large populations of neurons in vivo. Imaging in rhesus macaque motor cortex can enable the discovery of fundamental principles of motor cortical function and can inform the design of next generation brain-computer interfaces (BCIs). Surface two-photon imaging, however, cannot presently access somatic calcium signals of neurons from all layers of macaque motor cortex due to photon scattering. Here, we demonstrate an implant and imaging system capable of chronic, motion-stabilized two-photon imaging of neuronal calcium signals from macaques engaged in a motor task. By imaging apical dendrites, we achieved optical access to large populations of deep and superficial cortical neurons across dorsal premotor (PMd) and gyral primary motor (M1) cortices. Dendritic signals from individual neurons displayed tuning for different directions of arm movement. Combining several technical advances, we developed an optical BCI (oBCI) driven by these dendritic signalswhich successfully decoded movement direction online. By fusing two-photon functional imaging with CLARITY volumetric imaging, we verified that many imaged dendrites which contributed to oBCI decoding originated from layer 5 output neurons, including a putative Betz cell. This approach establishes new opportunities for studying motor control and designing BCIs via two photon imaging.

Indexed as

Brain-Computer InterfacesAnimalsCalciumCalcium-Binding ProteinsDendritesGreen Fluorescent ProteinsImplants, ExperimentalIntravital MicroscopyMacaca mulattaMaleModels, NeurologicalMotor ActivityMotor CortexMultimodal ImagingNeuronsPhotonsCalciumCalcium-Binding ProteinsGreen Fluorescent Proteins

Identifiers

PMID34140486
PMCPMC8211867
OpenAlexW3167850405

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.