Evidence map›Paper›PMID 34139990›Full record

ArticleBMC genomics2021

Simultaneous changes in anthocyanin, chlorophyll, and carotenoid contents produce green variegation in pink-leaved ornamental kale.

Yang Liu, Xin Feng, Yuting Zhang, Fuhui Zhou, Pengfang Zhu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
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  10. Molecular Mechanisms of Chlorophyll Deficiency inPlants (Basel, Switzerland) · 2024
    Article
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  12. Article
  13. A single-base insertion in BoDFR1 results in loss of anthocyanins in green-leaved ornamental kale.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yang LiuCollege of Forestry, Shenyang Agricultural University, Shenyang, 110866, China.
Xin FengCollege of Forestry, Shenyang Agricultural University, Shenyang, 110866, China.
Yuting ZhangCollege of Forestry, Shenyang Agricultural University, Shenyang, 110866, China.
Fuhui ZhouCollege of Forestry, Shenyang Agricultural University, Shenyang, 110866, China.
Pengfang ZhuCollege of Forestry, Shenyang Agricultural University, Shenyang, 110866, China. pengfangzhu@syau.edu.cn.
Shenyang Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAnthocyanin, chlorophyll, and carotenoid pigments are widely distributed in plants, producing various colors. Ornamental kale (Brassica oleracea var. acephala DC) which has colorful inner leaves is an ideal plant to explore how these three pigments contribute to leaf color. The molecular mechanisms of the coloration in ornamental kale could provide reference for exploring the mechanisms of pigmentation in other plants.

resultsIn this study, we sequenced the transcriptome and determined the pigment contents of an unusual cultivar of ornamental kale with three different types of leaf coloration: pink (C3), light pink (C2), and variegated pink-green (C1). A total of 23,965 differentially expressed genes were detected in pairwise comparisons among the three types of leaves. The results indicate that Bo9g058630 coding dihydroflavonol 4-reductase (DFR) and Bo3g019080 coding shikimate O-hydroxycinnamoyltransferase (HCT) acted in anthocyanin biosynthesis in pink leaves. Bo1g053420 coding pheophorbidase (PPD) and Bo3g012430 coding 15-cis-phytoene synthase (crtB) were identified as candidate genes for chlorophyll metabolism and carotenoid biosynthesis, respectively. The transcription factors TT8, MYBL2, GATA21, GLK2, and RR1 might participate in triggering the leaf color change in ornamental kale. Anthocyanin content was highest in C3 and lowest in C1. Chlorophyll and carotenoid contents were lowest in C2 and highest in C1.

conclusionsBased on these findings, we suspected that the decrease in anthocyanin biosynthesis and the increase in chlorophyll and carotenoid biosynthesis might be the reason for the leaf changing from pink to variegate pink-green in this unusual cultivar. Our research provides insight into the molecular mechanisms of leaf coloration in ornamental kale, contributing to a theoretical foundation for breeding new varieties.

Indexed as

AnthocyaninsBrassicaCarotenoidsChlorophyllGene Expression Regulation, PlantPigmentationPlant BreedingPlant LeavesPlant ProteinsAnthocyaninsCarotenoidsChlorophyllPlant ProteinsAnthocyaninCarotenoidsChlorophyllLeaf colorOrnamental kaleTranscriptome analysisVariegated leaf

Identifiers

PMID34139990
PMCPMC8212504
OpenAlexW3168059550

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.