Evidence map›Paper›PMID 34139175›Full record

ArticleCell2021

Scap structures highlight key role for rotation of intertwined luminal loops in cholesterol sensing.

Daniel L Kober, Arun Radhakrishnan, Joseph L Goldstein, Michael S Brown, Lindsay D Clark, Xiao-Chen Bai, Daniel M Rosenbaum

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Crosstalk between protein lipidation and ubiquitination in tumor biology.Apoptosis : an international journal on programmed cell death · 2026
    Review
  5. Article
  6. Review
  7. Review
  8. Article
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  10. Review
  11. Phosphorylation of Insig-2 mediates inhibition of fatty acid synthesis by polyunsaturated fatty acids.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Article
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  15. Direct binding to sterols accelerates endoplasmic reticulum-associated degradation of HMG CoA reductase.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Daniel L KoberDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Molecular Genetics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Arun RadhakrishnanDepartment of Molecular Genetics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: arun.radhakrishnan@utsouthwestern.edu.
Joseph L GoldsteinDepartment of Molecular Genetics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Michael S BrownDepartment of Molecular Genetics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Lindsay D ClarkDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Xiao-Chen BaiDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: xiaochen.bai@utsouthwestern.edu.
Daniel M RosenbaumDepartment of Biophysics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: dan.rosenbaum@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · US

Funding

TRANSCRIPTIONAL REGULATION OF LDL RECEPTOR PROMOTERP01HL020948 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI GOLDSTEIN, JOSEPH L · 1985 to 2021
$103.1M
Tissue Culture & Antibody Production CoreP01HL160487 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI Helen Haskell Hobbs · 2022 to 2026
$14.9M
UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Jeff G McDonald · 2022 to 2026
$7.4M
Structural mechanisms of Scap/SREBP signaling in membrane homeostasisR35GM136387 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Daniel Rosenbaum · 2020 to 2026
$3.0M
Structural and Functional Analyses of the Full-length Insulin Receptor (IR) and Type 1 Insulin-like Growth Factor Receptor (IGF1R) in the Liganded Active StateR01GM136976 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI BAI, XIAOCHEN · 2020 to 2024
$1.8M
NHLBI NIH HHS P01 HL020948NHLBI NIH HHS P01 HL160487NIDDK NIH HHS P30 DK127984NIGMS NIH HHS R01 GM136976NIGMS NIH HHS R35 GM136387
6 · The paper itself

Abstract

The cholesterol-sensing protein Scap induces cholesterol synthesis by transporting membrane-bound transcription factors called sterol regulatory element-binding proteins (SREBPs) from the endoplasmic reticulum (ER) to the Golgi apparatus for proteolytic activation. Transport requires interaction between Scap's two ER luminal loops (L1 and L7), which flank an intramembrane sterol-sensing domain (SSD). Cholesterol inhibits Scap transport by binding to L1, which triggers Scap's binding to Insig, an ER retention protein. Here we used cryoelectron microscopy (cryo-EM) to elucidate two structures of full-length chicken Scap: (1) a wild-type free of Insigs and (2) mutant Scap bound to chicken Insig without cholesterol. Strikingly, L1 and L7 intertwine tightly to form a globular domain that acts as a luminal platform connecting the SSD to the rest of Scap. In the presence of Insig, this platform undergoes a large rotation accompanied by rearrangement of Scap's transmembrane helices. We postulate that this conformational change halts Scap transport of SREBPs and inhibits cholesterol synthesis.

Indexed as

Amino Acid SequenceAnimalsAntibodiesChickensCholesterolMembrane ProteinsModels, BiologicalModels, MolecularProtein BindingProtein DomainsProtein Structure, SecondaryStructure-Activity RelationshipAntibodiesCholesterolMembrane Proteinscholesterolcryo-electron microscopyendoplasmic reticulumGolgi apparatusInsiglipid metabolismmembrane homeostasisScapSREBP

Identifiers

PMID34139175
PMCPMC8277531
OpenAlexW3170321061

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.