Evidence map›Paper›PMID 34138726›Full record

ArticleJournal of medical Internet research2021

Online Interactive Platform for COVID-19 Literature Visual Analytics: Platform Development Study.

Addy Moran, Shawn Hampton, Scott Dowson, John Dagdelen, Amalie Trewartha, Gerbrand Ceder, Kristin Persson, Elise Saxon, Andrew Barker, Lauren Charles and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of medical Internet research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Addy MoranPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0001-6922-5011
Shawn HamptonPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0003-4313-9961
Scott DowsonPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0002-3071-5256
John DagdelenLawrence Berkeley National Laboratory, Berkeley, CA, United States.ORCID 0000-0003-2181-4815
Amalie TrewarthaLawrence Berkeley National Laboratory, Berkeley, CA, United States.ORCID 0000-0001-6095-8032
Gerbrand CederLawrence Berkeley National Laboratory, Berkeley, CA, United States.ORCID 0000-0001-9275-3605
Kristin PerssonLawrence Berkeley National Laboratory, Berkeley, CA, United States.ORCID 0000-0003-2495-5509
Elise SaxonPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0002-4575-3394
Andrew BarkerPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0003-3107-9041
Lauren CharlesPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0003-0727-0479
Bobbie-Jo Webb-RobertsonPacific Northwest National Laboratory, Richland, WA, United States.ORCID 0000-0002-4744-2397
Pacific Northwest National Laboratory · USLawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPapers on COVID-19 are being published at a high rate and concern many different topics. Innovative tools are needed to aid researchers to find patterns in this vast amount of literature to identify subsets of interest in an automated fashion.

objectiveWe present a new online software resource with a friendly user interface that allows users to query and interact with visual representations of relationships between publications.

methodsWe publicly released an application called PLATIPUS (Publication Literature Analysis and Text Interaction Platform for User Studies) that allows researchers to interact with literature supplied by COVIDScholar via a visual analytics platform. This tool contains standard filtering capabilities based on authors, journals, high-level categories, and various research-specific details via natural language processing and dozens of customizable visualizations that dynamically update from a researcher's query.

resultsPLATIPUS is available online and currently links to over 100,000 publications and is still growing. This application has the potential to transform how COVID-19 researchers use public literature to enable their research.

conclusionsThe PLATIPUS application provides the end user with a variety of ways to search, filter, and visualize over 100,00 COVID-19 publications.

Indexed as

COVID-19Image Interpretation, Computer-AssistedInformation Storage and RetrievalSARS-CoV-2HumansNatural Language ProcessingSoftwareUser-Computer InterfaceCOVID-19interactiveliteraturenatural language processingonline platformpatternpublishresearchscientific literaturesoftwaretoolusabilityvisual analytics

Identifiers

PMID34138726
PMCPMC8288648
OpenAlexW3170273072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.