Evidence map›Paper›PMID 34136576›Full record

ArticleBioMed research international2021

Designing of Potential Polyvalent Vaccine Model for Respiratory Syncytial Virus by System Level Immunoinformatics Approaches.

Syeda Tahira Qousain Naqvi, Mamoona Yasmeen, Mehreen Ismail, Syed Aun Muhammad, Syed Nawazish-I-Husain, Amjad Ali, Fahad Munir, QiYu Zhang

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Experimental trials of predicted CD4Frontiers in immunology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Syeda Tahira Qousain NaqviInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University Multan, Pakistan.
Mamoona YasmeenInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University Multan, Pakistan.
Mehreen IsmailInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University Multan, Pakistan.
Syed Aun MuhammadInstitute of Molecular Biology and Biotechnology, Bahauddin Zakariya University Multan, Pakistan.ORCID https://orcid.org/0000-0002-8068-4144
Syed Nawazish-I-HusainUniversity College of Pharmacy, Punjab University Lahore, Pakistan.
Amjad AliASAB, National University of Sciences and Technology (NUST), Islamabad, Pakistan.
Fahad MunirDepartment of Hepatobiliary Surgery, The First Affiliated Hospital of Wenzhou Medical University, China.
QiYu ZhangDepartment of Hepatobiliary Surgery, The First Affiliated Hospital of Wenzhou Medical University, China.ORCID https://orcid.org/0000-0001-5463-6459
Bahauddin Zakariya University · PKWenzhou Medical University · CNNational University of Sciences and Technology · PKUniversity of the Punjab · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRespiratory syncytial virus (RSV) infection is a public health epidemic, leading to around 3 million hospitalization and about 66,000 deaths each year. It is a life-threatening condition exclusive to children with no effective treatment.

methodsIn this study, we used system-level and vaccinomics approaches to design a polyvalent vaccine for RSV, which could stimulate the immune components of the host to manage this infection. Our framework involves data accession, antigenicity and subcellular localization analysis, T cell epitope prediction, proteasomal and conservancy evaluation, host-pathogen-protein interactions, pathway studies, and

resultsWe found glycoprotein (G), fusion protein (F), and small hydrophobic protein (SH) of RSV as potential vaccine candidates. Of these proteins (G, F, and SH), we found 9 epitopes for multiple alleles of MHC classes I and II bear significant binding affinity. These potential epitopes were linked to form a polyvalent construct using AAY, GPGPG linkers, and cholera toxin B adjuvant at N-terminal with a 23.9 kDa molecular weight of 224 amino acid residues. The final construct was a stable, immunogenic, and nonallergenic protein containing cleavage sites, TAP transport efficiency, posttranslation shifts, and CTL epitopes. The molecular docking indicated the optimum binding affinity of RSV polyvalent construct with MHC molecules (-12.49 and -10.48 kcal/mol for MHC classes I and II, respectively). This interaction showed that a polyvalent construct could manage and control this disease.

conclusionOur vaccinomics and system-level investigation could be appropriate to trigger the host immune system to prevent RSV infection.

Indexed as

Respiratory Syncytial Virus, HumanAllelesAntigensCodonComputational BiologyComputer SimulationEpitopesEpitopes, T-LymphocyteGlycoproteinsHistocompatibility Antigens Class IHistocompatibility Antigens Class IIHospitalizationHumansImmune SystemMolecular Docking SimulationProteasome Endopeptidase ComplexAntigensCodonEpitopesEpitopes, T-LymphocyteGlycoproteinsHistocompatibility Antigens Class IHistocompatibility Antigens Class IIProteasome Endopeptidase ComplexVaccinesVaccines, CombinedViral Fusion Proteins

Identifiers

PMID34136576
PMCPMC8177976
OpenAlexW3168928975

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.