Evidence map›Paper›PMID 34136086›Full record

ArticleOncotarget2021

Genomic clustering analysis identifies molecular subtypes of thymic epithelial tumors independent of World Health Organization histologic type.

Sukhmani K Padda, Yesim Gökmen-Polar, Jessica A Hellyer, Sunil S Badve, Neeraj K Singh, Sumanth M Vasista, Kabya Basu, Ansu Kumar, Heather A Wakelee

Open access · diamondAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Oncotarget, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sukhmani K PaddaStanford University School of Medicine/Stanford Cancer Institute, Stanford, CA, USA.
Yesim Gökmen-PolarIndiana University School of Medicine, Indianapolis, IN, USA.
Jessica A HellyerStanford University School of Medicine/Stanford Cancer Institute, Stanford, CA, USA.
Sunil S BadveIndiana University School of Medicine, Indianapolis, IN, USA.
Neeraj K SinghCellworks Group, San Jose, CA, USA.
Sumanth M VasistaCellworks Group, San Jose, CA, USA.
Kabya BasuCellworks Group, San Jose, CA, USA.
Ansu KumarCellworks Group, San Jose, CA, USA.
Heather A WakeleeStanford University School of Medicine/Stanford Cancer Institute, Stanford, CA, USA.
Stanford Cancer InstituteIndiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Further characterization of thymic epithelial tumors (TETs) is needed. Genomic information from 102 evaluable TETs from The Cancer Genome Atlas (TCGA) dataset and from the IU-TAB-1 cell line (type AB thymoma) underwent clustering analysis to identify molecular subtypes of TETs. Six novel molecular subtypes (TH1-TH6) of TETs from the TCGA were identified, and there was no association with WHO histologic subtype. The IU-TAB-1 cell line clustered into the TH4 molecular subtype and

Indexed as

clusteringcomputational analysisgenomicsthymic epithelial tumorthymoma

Identifiers

PMID34136086
PMCPMC8202771
OpenAlexW3168817490

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.