Evidence map›Paper›PMID 34135910›Full record

ArticleFrontiers in immunology2021

Single-Cell Profiling Reveals Transcriptional Signatures and Cell-Cell Crosstalk in Anti-PLA2R Positive Idiopathic Membranous Nephropathy Patients.

Jie Xu, Chanjuan Shen, Wei Lin, Ting Meng, Joshua D Ooi, Peter J Eggenhuizen, Rong Tang, Gong Xiao, Peng Jin, Xiang Ding and 7 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 48 citations in OpenAlex.

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  18. Type I IFN in Glomerular Disease: Scarring beyond the STING.International journal of molecular sciences · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Jie XuDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Chanjuan ShenDepartment of Hematology, The Affiliated Zhuzhou Hospital Xiangya Medical College, Central South University, Zhuzhou, China.
Wei LinDepartment of Pathology, Xiangya Hospital, Central South University, Changsha, China.
Ting MengDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Joshua D OoiDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Peter J EggenhuizenCentre for Inflammatory Diseases, Monash University Department of Medicine, Monash Medical Centre, Clayton, VIC, Australia.
Rong TangDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Gong XiaoDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Peng JinDepartment of Organ Transplantation, Xiangya Hospital, Central South University, Changsha, China.
Xiang DingDepartment of Organ Transplantation, Xiangya Hospital, Central South University, Changsha, China.
Yangshuo TangDepartment of Ultrasonography, Xiangya Hospital, Central South University, Changsha, China.
Weisheng PengDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Wannian NieDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Xiang AoDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Xiangcheng XiaoDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Yong ZhongDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Qiaoling ZhouDepartment of Nephrology, Xiangya Hospital, Central South University, Changsha, China.
Xiangya Hospital Central South University · CNCentral South University · CNMonash Medical Centre · AUZhuzhou Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Idiopathic membranous nephropathy (IMN) is an organ-specific autoimmune disease of the kidney glomerulus. It may gradually progress to end-stage renal disease (ESRD) characterized by increased proteinuria, which leads to serious consequences. Although substantial advances have been made in the understanding of the molecular bases of IMN in the last 10 years, certain questions remain largely unanswered. To define the transcriptomic landscape at single-cell resolution, we analyzed kidney samples from 6 patients with anti-PLA2R positive IMN and 2 healthy control subjects using single-cell RNA sequencing. We then identified distinct cell clusters through unsupervised clustering analysis of kidney specimens. Identification of the differentially expressed genes (DEGs) and enrichment analysis as well as the interaction between cells were also performed. Based on transcriptional expression patterns, we identified all previously described cell types in the kidney. The DEGs in most kidney parenchymal cells were primarily enriched in genes involved in the regulation of inflammation and immune response including IL-17 signaling, TNF signaling, NOD-like receptor signaling, and MAPK signaling. Moreover, cell-cell crosstalk highlighted the extensive communication of mesangial cells, which infers great importance in IMN. IMN with massive proteinuria displayed elevated expression of genes participating in inflammatory signaling pathways that may be involved in the pathogenesis of the progression of IMN. Overall, we applied single-cell RNA sequencing to IMN to uncover intercellular interactions, elucidate key pathways underlying the pathogenesis, and identify novel therapeutic targets of anti-PLA2R positive IMN.

Indexed as

Gene Expression ProfilingTranscriptomeAutoantibodiesBiomarkersCell CommunicationComputational BiologyGene Expression RegulationGlomerulonephritis, MembranousHumansOrgan SpecificityReceptors, Phospholipase A2Single-Cell AnalysisAutoantibodiesBiomarkersPLA2R1 protein, humanReceptors, Phospholipase A2idiopathic membranous nephropathyimmune responseinflammationkidneysingle-cell RNA sequence

Identifiers

PMID34135910
PMCPMC8202011
OpenAlexW3170592042

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.