Evidence map›Paper›PMID 34134625›Full record

ArticleBMC ecology and evolution2021

Positive selection on the MHC class II DLA-DQA1 gene in golden jackals (Canis aureus) from their recent expansion range in Europe and its effect on their body mass index.

Milomir Stefanović, Duško Ćirović, Neda Bogdanović, Felix Knauer, Miklós Heltai, László Szabó, József Lanszki, Chavdar Dinev Zhelev, Helmut Schaschl, Franz Suchentrunk

Open access · goldAbstract read
In one paragraph

Article in BMC ecology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
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  3. Article
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Milomir StefanovićDepartment of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Trg Dositeja Obradovića 2, 21000, Novi Sad, Serbia.
Duško ĆirovićFaculty of Biology, University of Belgrade, Studentski trg 16, 11000, Belgrade, Serbia.
Neda BogdanovićFaculty of Biology, University of Belgrade, Studentski trg 16, 11000, Belgrade, Serbia.
Felix KnauerResearch Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Savoyenstrasse 1, 1160, Vienna, Austria.
Miklós HeltaiInstitute for Wildlife Conservation, Szent István University, Páter Károly utca 1, Gödöllő, 2100, Hungary.
László SzabóInstitute for Wildlife Conservation, Szent István University, Páter Károly utca 1, Gödöllő, 2100, Hungary.
József LanszkiEcological Research Group, University of Kaposvár, PO Box 16, 7401, Kaposvár, Hungary.
Chavdar Dinev ZhelevSouthwest State Forestry Enterprise, 2700, Blagoevgrad, Bulgaria.
Helmut SchaschlDepartment of Evolutionary Anthropology, University of Vienna, Althanstrasse 14, 1090, Vienna, Austria. helmut.schaschl@univie.ac.at.ORCID 0000-0003-2826-8773
Franz SuchentrunkResearch Institute of Wildlife Ecology, University of Veterinary Medicine Vienna, Savoyenstrasse 1, 1160, Vienna, Austria.
University of Veterinary Medicine Vienna · ATMagyar Agrár- és Élettudományi Egyetem · HUUniversity of Belgrade · RSUniversity of Kaposvár · HUUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn Europe, golden jackals (Canis aureus) have been expanding their range out of the southern and southeastern Balkans towards central Europe continually since the 1960s. Here, we investigated the level of functional diversity at the MHC class II DLA-DQA1 exon 2 in golden jackal populations from Bulgaria, Serbia, and Hungary. Specifically, we tested for positive selection on and geographic variation at that locus due to adaptation to supposedly regionally varying pathogenic landscapes. To test for potential fitness effects of different protein variants on individual body condition, we used linear modeling of individual body mass indexes (bmi) and accounted for possible age, sex, geographical, and climatic effects. The latter approach was performed, however, only on Serbian individuals with appropriate data.

resultsOnly three different DLA-DQA1 alleles were detected, all coding for different amino-acid sequences. The neutrality tests revealed no significant but positive values; there was no signal of spatial structuring and no deviation from the Hardy-Weinberg equilibrium across the studied range of expansion. However, we found a signal of trans-species polymorphism and significant test results for positive selection on three codons. Our information-theory based linear modeling results indicated an effect of ambient temperature on the occurrence of individual DLA-DQA1 genotypes in individuals from across the studied expansion range, independent from geographical position. Our linear modeling results of individual bmi values indicated that yearlings homozygous for DLA-DQA1*03001 reached values typical for adults contrary to yearlings carrying other genotypes (protein combinations). This suggested better growth rates and thus a possible fitness advantage of yearlings homozygous for DLA-DQA1*03001.

conclusionsOur results indicate a demographic (stochastic) signal of reduced DLA-DQA1 exon 2 variation, in line with the documented historical demographic bottleneck. At the same time, however, allelic variation was also affected by positive selection and adaptation to varying ambient temperature, supposedly reflecting geographic variation in the pathogenic landscape. Moreover, an allele effect on body mass index values of yearlings suggested differential fitness associated with growth rates. Overall, a combination of a stochastic effect and positive selection has shaped and is still shaping the variation at the studied MHC locus.

Indexed as

Genes, MHC Class IIJackalsSelection, GeneticAnimalsBalkan PeninsulaBody Mass IndexBulgariaHungarySerbiaAdaptationBulgariaDLAGolden jackalsHungaryMHCSelectionSerbia

Identifiers

PMID34134625
PMCPMC8207625
OpenAlexW3172208621

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.