Evidence map›Paper›PMID 34133899›Full record

ArticleJournal of virology2021

Contribution of SARS-CoV-2 Accessory Proteins to Viral Pathogenicity in K18 Human ACE2 Transgenic Mice.

Jesus A Silvas, Desarey Morales Vasquez, Jun-Gyu Park, Kevin Chiem, Anna Allué-Guardia, Andreu Garcia-Vilanova, Roy Neal Platt, Lisa Miorin, Thomas Kehrer, Anastasija Cupic and 7 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed, 2 pooled it
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 2 syntheses or guidelines pooled it, 141 citations in OpenAlex.

  1. Pooled it
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  13. SARS-CoV-2-derived RNA replicons as safe and effective vaccines.Proceedings of the National Academy of Sciences of the United States of America · 2025
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34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

Jesus A SilvasTexas Biomedical Research Institute, San Antonio, Texas, USA.
Desarey Morales VasquezTexas Biomedical Research Institute, San Antonio, Texas, USA.
Jun-Gyu ParkTexas Biomedical Research Institute, San Antonio, Texas, USA.
Kevin ChiemTexas Biomedical Research Institute, San Antonio, Texas, USA.
Anna Allué-GuardiaTexas Biomedical Research Institute, San Antonio, Texas, USA.
Andreu Garcia-VilanovaTexas Biomedical Research Institute, San Antonio, Texas, USA.
Roy Neal PlattTexas Biomedical Research Institute, San Antonio, Texas, USA.
Lisa MiorinDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Thomas KehrerDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Anastasija CupicDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Ana S Gonzalez-ReicheDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Harm van BakelDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Adolfo García-SastreDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Tim AndersonTexas Biomedical Research Institute, San Antonio, Texas, USA.
Jordi B TorrellesTexas Biomedical Research Institute, San Antonio, Texas, USA.
Chengjin YeTexas Biomedical Research Institute, San Antonio, Texas, USA.
Luis Martinez-SobridoTexas Biomedical Research Institute, San Antonio, Texas, USA.
Texas Biomedical Research Institute · USIcahn School of Medicine at Mount Sinai · US

Funding

The origin and future protective activity of SARS-CoV-2 RBD specific neutralizing antibodiesR01AI161175 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI KOBIE, JAMES J, MARTINEZ-SOBRIDO, LUIS · 2021 to 2024
$2.5M
Big Omics Data Engine 2 SupercomputerS10OD026880 · OD · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI KOVATCH, PATRICIA · 2019 to 2019
$2.0M
NIAID NIH HHS HHSN272201400008CNIAID NIH HHS R01 AI161175NIH HHS S10 OD026880
6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the viral pathogen responsible for the current coronavirus disease 2019 (COVID-19) pandemic. As of 19 May 2021, John Hopkins University's COVID-19 tracking platform reported 3.3 million deaths associated with SARS-CoV-2 infection. Currently, the World Health Organization has granted emergency use listing (EUL) to six COVID-19 vaccine candidates. However, much of the pathogenesis observed during SARS-CoV-2 infection remains elusive. To gain insight into the contribution of individual accessory open reading frame (ORF) proteins in SARS-CoV-2 pathogenesis, we used our recently described reverse-genetics system approach to successfully engineer recombinant SARS-CoV-2 (rSARS-CoV-2) constructs; we removed individual viral ORF3a, -6, -7a, -7b, and -8 proteins from them, and we characterized the resulting recombinant viruses

Indexed as

SARS-CoV-2Viral ProteinsA549 CellsAngiotensin-Converting Enzyme 2AnimalsChlorocebus aethiopsCOVID-19 VaccinesHEK293 CellsHumansMiceMice, TransgenicOpen Reading FramesVaccines, AttenuatedVero CellsACE2 protein, humanAngiotensin-Converting Enzyme 2COVID-19 VaccinesVaccines, AttenuatedViral ProteinsCOVID-19hACE2K18 hACE2 transgenic miceORF3aORF6ORF7aORF7bORF8pathogenesisSARS-CoV-2

Identifiers

PMID34133899
PMCPMC8354228
OpenAlexW3172924690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.