Evidence map›Paper›PMID 34133814›Full record

ArticleBJU international2022

Towards automatic recognition of pure and mixed stones using intra-operative endoscopic digital images.

Vincent Estrade, Michel Daudon, Emmanuel Richard, Jean-Christophe Bernhard, Franck Bladou, Grégoire Robert, Baudouin Denis de Senneville

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In one paragraph

Article in BJU international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

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0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Vincent EstradeDepartment of Urology, CHU Pellegrin, Bordeaux, France.ORCID 0000-0003-3927-487X
Michel DaudonDepartment of Multidisciplinary Functional Explorations, AP-HP, Tenon Hospital, INSERM UMRS 1155, Sorbonne University, Paris, France.
Emmanuel RichardINSERM, BMGIC, U1035, CHU Bordeaux, University of Bordeaux, Bordeaux, France.
Jean-Christophe BernhardDepartment of Urology, CHU Pellegrin, Bordeaux, France.
Franck BladouDepartment of Urology, CHU Pellegrin, Bordeaux, France.
Grégoire RobertDepartment of Urology, CHU Pellegrin, Bordeaux, France.
Baudouin Denis de SennevilleIMB, UMR CNRS 5251, University of Bordeaux, Talence Cedex, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo assess automatic computer-aided in situ recognition of the morphological features of pure and mixed urinary stones using intra-operative digital endoscopic images acquired in a clinical setting. MATERIALS AND

methodsIn this single-centre study, a urologist with 20 years' experience intra-operatively and prospectively examined the surface and section of all kidney stones encountered. Calcium oxalate monohydrate (COM) or Ia, calcium oxalate dihydrate (COD) or IIb, and uric acid (UA) or IIIb morphological criteria were collected and classified to generate annotated datasets. A deep convolutional neural network (CNN) was trained to predict the composition of both pure and mixed stones. To explain the predictions of the deep neural network model, coarse localization heat-maps were plotted to pinpoint key areas identified by the network.

resultsThis study included 347 and 236 observations of stone surface and stone section, respectively; approximately 80% of all stones exhibited only one morphological type and approximately 20% displayed two. A highest sensitivity of 98% was obtained for the type 'pure IIIb/UA' using surface images. The most frequently encountered morphology was that of the type 'pure Ia/COM'; it was correctly predicted in 91% and 94% of cases using surface and section images, respectively. Of the mixed type 'Ia/COM + IIb/COD', Ia/COM was predicted in 84% of cases using surface images, IIb/COD in 70% of cases, and both in 65% of cases. With regard to mixed Ia/COM + IIIb/UA stones, Ia/COM was predicted in 91% of cases using section images, IIIb/UA in 69% of cases, and both in 74% of cases.

conclusionsThis preliminary study demonstrates that deep CNNs are a promising method by which to identify kidney stone composition from endoscopic images acquired intra-operatively. Both pure and mixed stone composition could be discriminated. Collected in a clinical setting, surface and section images analysed by a deep CNN provide valuable information about stone morphology for computer-aided diagnosis.

Indexed as

Kidney CalculiUrinary CalculiCalcium OxalateEndoscopyHumansUric AcidCalcium OxalateUric Acidaetiological lithiasisautomatic recognitiondeep learningendoscopic diagnosis#EndoUrology#KidneyStonesmorpho-constitutional analysis of urinary stones#Urology#UroStone

Identifiers

PMID34133814
PMCPMC9292712

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.