Evidence map›Paper›PMID 34131849›Full record

ArticleArchives of virology2021

Evolutionary dynamics of group A and B respiratory syncytial virus in China, 2009-2018.

Yingying Ma, Haixia Jiang, Zhenzhou Wan, Shenwei Li, Yingxue Li, Wei Wang, Xia Jin, Yanpeng Li, Chiyu Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yingying MaShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Haixia JiangShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Zhenzhou WanMedical Laboratory of Taizhou Fourth People's Hospital, Taizhou, China.
Shenwei LiShanghai International Travel Healthcare Center, Shanghai, China.
Yingxue LiShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Wei WangShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Xia JinShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China.
Yanpeng LiShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China. alphaleeyp@hotmail.com.
Chiyu ZhangShanghai Public Health Clinical Center, Fudan University, Shanghai, 201508, China. zhangcy1999@shphc.org.cn.ORCID http://orcid.org/0000-0001-8735-9857
Shanghai Public Health Clinical Center · CNShenzhen International Travel Health Care Center · CNTaizhou Fourth People's Hospital · CN

Funding

Health Commission of Jiangsu Province Z2019038National Major Science and Technology Projects of China (CN) 2017ZX10103009-002the National Science and Technology Major Project of China 2017ZX10103009-001
6 · The paper itself

Abstract

Respiratory syncytial virus (RSV) is a major cause of acute respiratory tract infections in children and is a public health threat globally. To investigate the spatiotemporal dynamics of RSV evolution, we performed systematic phylogenetic analysis using all available sequences from the GenBank database, together with sequences from Shanghai, China. Both RSV-A and RSV-B appear to have originated in North America, with an inferred origin time of 1954.0 (1938.7-1967.6) and 1969.7 (1962.6-1975.5), respectively. BA-like strains of RSV-B, with a 60-nt insertion, and the ON1 strain of RSV-A, with a 72-nt insertion, emerged in 1997.6 (1996.2-1998.6) and 2010.1 (2009.1-2010.3), respectively. Since their origin, both genotypes have gradually replaced the former circulating genotypes to become the dominant strain. The population dynamic of RSV-A showed a seasonal epidemic pattern with obvious expansion in the periods of 2006-2007, 2010-2011, 2011-2012, and 2013-2014. Thirty fixed amino acid substitutions were identified during the divergence of NA4 from GA1 genotypes of RSV-A, and 13 were found during the divergence of SAB4 from GB1 of RSV-B. Importantly, ongoing evolution has occurred since the emergence of ON1, including four amino acid substitutions (I208L, E232G, T253K, and P314L). RSV-A genotypes GA5, NA4, NA1, and ON1 and RSV-B genotypes CB1, SAB4, BA-C, BA10, BA7, and BA9 were co-circulating in China from 2005 to 2015. In particular, RSV-A genotype ON1 was first detected in China in 2011, and it completely replaced GA2 to become the predominant strain after 2016. These data provide important insights into the evolution and epidemiology of RSV.

Indexed as

PhylogenyChildChinaGenotypeHumansMolecular EpidemiologyRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsRespiratory Tract Infections

Identifiers

PMID34131849
OpenAlexW3167879198

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.