Evidence map›Paper›PMID 34131076›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Estimating genetic nurture with summary statistics of multigenerational genome-wide association studies.

Yuchang Wu, Xiaoyuan Zhong, Yunong Lin, Zijie Zhao, Jiawen Chen, Boyan Zheng, James J Li, Jason M Fletcher, Qiongshi Lu

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Indirect genetic effects across ontogeny in an avian cooperative breeder.bioRxiv : the preprint server for biology · 2026
    Article
  6. Estimating uncertainty in family-based GWAS.bioRxiv : the preprint server for biology · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. A Litmus Test for Confounding in Polygenic Scores.bioRxiv : the preprint server for biology · 2025
    Article
  15. Article
  16. Article
  17. Controlling for polygenic genetic confounding in epidemiologic association studies.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yuchang WuDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI 53706.
Xiaoyuan ZhongDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI 53706.
Yunong LinDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI 53706.ORCID 0000-0002-6822-492X
Zijie ZhaoDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI 53706.ORCID 0000-0001-6502-5821
Jiawen ChenDepartment of Statistics, University of Wisconsin-Madison, Madison, WI 53706.
Boyan ZhengCenter for Demography of Health and Aging, University of Wisconsin-Madison, Madison, WI 53706.ORCID 0000-0002-1294-3570
James J LiCenter for Demography of Health and Aging, University of Wisconsin-Madison, Madison, WI 53706.
Jason M FletcherCenter for Demography of Health and Aging, University of Wisconsin-Madison, Madison, WI 53706.
Qiongshi LuDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI 53706; qlu@biostat.wisc.edu.ORCID 0000-0002-4514-0969

Funding

University of Wisconsin Institute for Clinical and Translational ResearchUL1TR002373 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI ELIZABETH S BURNSIDE, Allan R. Brasier · 2017 to 2026
$75.9M
Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
NCATS NIH HHS UL1 TR000427NCATS NIH HHS UL1 TR002373
6 · The paper itself

Abstract

Marginal effect estimates in genome-wide association studies (GWAS) are mixtures of direct and indirect genetic effects. Existing methods to dissect these effects require family-based, individual-level genetic, and phenotypic data with large samples, which is difficult to obtain in practice. Here, we propose a statistical framework to estimate direct and indirect genetic effects using summary statistics from GWAS conducted on own and offspring phenotypes. Applied to birth weight, our method showed nearly identical results with those obtained using individual-level data. We also decomposed direct and indirect genetic effects of educational attainment (EA), which showed distinct patterns of genetic correlations with 45 complex traits. The known genetic correlations between EA and higher height, lower body mass index, less-active smoking behavior, and better health outcomes were mostly explained by the indirect genetic component of EA. In contrast, the consistently identified genetic correlation of autism spectrum disorder (ASD) with higher EA resides in the direct genetic component. A polygenic transmission disequilibrium test showed a significant overtransmission of the direct component of EA from healthy parents to ASD probands. Taken together, we demonstrate that traditional GWAS approaches, in conjunction with offspring phenotypic data collection in existing cohorts, could greatly benefit studies on genetic nurture and shed important light on the interpretation of genetic associations for human complex traits.

Indexed as

Family CharacteristicsGenome-Wide Association StudyStatistics as TopicAutism Spectrum DisorderBirth WeightEducational StatusFemaleHumansLinkage DisequilibriumMultifactorial InheritancePolymorphism, Single Nucleotidefamily-based studygenetic nurtureGWASindirect genetic effectsummary statistics

Identifiers

PMID34131076
PMCPMC8237646

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.