Evidence map›Paper›PMID 34130359›Full record

ArticleGenetic epidemiology2021

FAT4 identified as a potential modifier of orofacial cleft laterality.

Sarah W Curtis, Daniel Chang, Miranda R Sun, Michael P Epstein, Jeffrey C Murray, Eleanor Feingold, Terri H Beaty, Seth M Weinberg, Mary L Marazita, Robert J Lipinski and 2 more

Open access · greenAbstract read
In one paragraph

Article in Genetic epidemiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Cleft lip Sidedness and the Association with Additional Congenital Malformations.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2025
    Article
  6. Cleft Laterality Dental Arch Relationship Outcomes for Children with Unilateral Cleft Lip and Palate in New Zealand.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2025
    Article
  7. Sidedness in Unilateral Orofacial Clefts: A Systematic Scoping Review.The Cleft palate-craniofacial journal : official publication of the American Cleft Palate-Craniofacial Association · 2025
    Article
  8. Article
  9. Article
  10. Rare genetic variants inmedRxiv : the preprint server for health sciences · 2023
    Article
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Sarah W CurtisDepartment of Human Genetics, Emory University, Atlanta, Georgia, USA.ORCID 0000-0002-9131-9601
Daniel ChangDepartment of Human Genetics, Emory University, Atlanta, Georgia, USA.
Miranda R SunDepartment of Comparative Biosciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Michael P EpsteinDepartment of Human Genetics, Emory University, Atlanta, Georgia, USA.
Jeffrey C MurrayDepartment of Pediatrics, University of Iowa, Iowa City, Iowa, USA.
Eleanor FeingoldDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Terri H BeatyDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.
Seth M WeinbergDepartment of Oral and Craniofacial Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Mary L MarazitaDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Robert J LipinskiDepartment of Comparative Biosciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Jenna C CarlsonDepartment of Human Genetics, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.ORCID 0000-0001-5483-0833
Elizabeth J LeslieDepartment of Human Genetics, Emory University, Atlanta, Georgia, USA.ORCID 0000-0002-5735-1712
Emory University · USUniversity of Pittsburgh · USUniversity of Wisconsin–Madison · USJohns Hopkins University · USUniversity of Iowa · US

Funding

Extending the Phenotype of Nonsyndromic Orofacial CleftsR01DE016148 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L., WEINBERG, SETH M · 2004 to 2018
$19.7M
Molecular Genetic Epidemiology of Cleft Lip and PalateR37DE008559 · NIDCR · UNIVERSITY OF IOWA · PI MURRAY, JEFFREY C · 2004 to 2013
$6.8M
International Genetic Epidemiology of Oral CleftsR01DE014581 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI BEATY, TERRI H · 2004 to 2013
$6.6M
Genetic modifiers of Van der Woude syndromeR01DE028342 · NIDCR · EMORY UNIVERSITY · PI LESLIE-CLARKSON, ELIZABETH JANE · 2019 to 2023
$2.7M
International Consortium to Identify Genes and Interactions Controlling Oral ClefU01DE018993 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI BEATY, TERRI H · 2007 to 2008
$1.6M
Human genomics analysis interface for FaceBase 2U01DE024425 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L. · 2014 to 2018
$1.2M
GENETIC MAPPING STUDIES OF ORAL-FACIAL CLEFTS IN CHINAR01DE009886 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI MARAZITA, MARY L · 1992 to 2002
$1.0M
Genetics of Craniofacial Disorders and Related PhenotypesR00DE025060 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LESLIE-CLARKSON, ELIZABETH JANE · 2017 to 2019
$732k
Sequence-based discovery of risk and modifier variants for orofacial cleftsR03DE027103 · NIDCR · EMORY UNIVERSITY · PI LESLIE-CLARKSON, ELIZABETH JANE · 2018 to 2019
$312k
Planning International Orofacial Cleft Genetic StudiesR21DE016930 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L · 2006 to 2007
$293k
HOMOZYGOSITY MAPPING OF ORAL-FACIAL CLEFTS IN TURKEYR01DE012472 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARAZITA, MARY L · 1998 to 2000
$241k
NHGRI NIH HHS X01-HG007485NHGRI NIH HHS X01-HG007821NHLBI NIH HHS HHSN268201200008CNHLBI NIH HHS HHSN268201200008INIDCR NIH HHS HHSN268201200008INIDCR NIH HHS R00 DE025060NIDCR NIH HHS R00-DE025060NIDCR NIH HHS R01 DE009886NIDCR NIH HHS R01-DE009886NIDCR NIH HHS R01- DE012472NIDCR NIH HHS R01 DE014581NIDCR NIH HHS R01-DE014581NIDCR NIH HHS R01 DE016148NIDCR NIH HHS R01-DE016148NIDCR NIH HHS R01 DE028342NIDCR NIH HHS R03 DE027103NIDCR NIH HHS R21 DE016930NIDCR NIH HHS R21-DE016930NIDCR NIH HHS R37 DE008559NIDCR NIH HHS R37-DE008559NIDCR NIH HHS U01 DE018993NIDCR NIH HHS U01-DE018993NIDCR NIH HHS U01 DE024425NIDCR NIH HHS U01-DE024425
6 · The paper itself

Abstract

Orofacial clefts (OFCs) are common (1 in 700 births) congenital malformations that include a cleft lip (CL) and cleft lip and palate (CLP). These OFC subtypes are also heterogeneous themselves, with the CL occurring on the left, right, or both sides of the upper lip. Unilateral CL and CLP have a 2:1 bias towards left-sided clefts, suggesting a nonrandom process. Here, we performed a study of left- and right-sided clefts within the CL and CLP subtypes to better understand the genetic factors controlling cleft laterality. We conducted genome-wide modifier analyses by comparing cases that had right unilateral CL (RCL; N = 130), left unilateral CL (LCL; N = 216), right unilateral CLP (RCLP; N = 416), or left unilateral CLP (LCLP; N = 638), and identified a candidate region on 4q28, 400 kb downstream from FAT4, that approached genome-wide significance for LCL versus RCL (p = 8.4 × 10

Indexed as

Cleft LipCleft PalateCadherinsHumansTumor Suppressor ProteinsCadherinsFAT4 protein, humanTumor Suppressor Proteinsbirth defectcleft lipcleft lip and palategenetic modifiergenotype-phenotypeleft cleft lipright cleft lip

Identifiers

PMID34130359
PMCPMC8630827
OpenAlexW3165990017

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.