Evidence map›Paper›PMID 34127692›Full record

ArticleScientific reports2021

Inter-vendor performance of deep learning in segmenting acute ischemic lesions on diffusion-weighted imaging: a multicenter study.

Deniz Alis, Mert Yergin, Ceren Alis, Cagdas Topel, Ozan Asmakutlu, Omer Bagcilar, Yeseren Deniz Senli, Ahmet Ustundag, Vefa Salt, Sebahat Nacar Dogan and 6 more

Open access · goldAbstract readComparative StudyMulticenter Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 1 country.

Deniz AlisDepartment of Radiology, Acibadem Mehmet Ali Aydinlar University School of Medicine, Istanbul, Turkey. drdenizalis@gmail.com.
Mert YerginDepartment of Software Engineering and Applied Sciences, Bahcesehir University, Istanbul, Turkey.
Ceren AlisCerrahpaşa Medical Faculty, Neurology Department, Istanbul University-Cerrahpasa, Istanbul, Turkey.
Cagdas TopelDepartment of Radiology, Istanbul Mehmet Akif Ersoy Thoracic and Cardiovascular Surgery Training and Research Hospital, Halkali/Istanbul, Turkey.
Ozan AsmakutluDepartment of Radiology, Istanbul Mehmet Akif Ersoy Thoracic and Cardiovascular Surgery Training and Research Hospital, Halkali/Istanbul, Turkey.
Omer BagcilarRadiology Department, Istanbul Silivri State Hospital, Istanbul, Turkey.
Yeseren Deniz SenliCerrahpaşa Medical Faculty, Radiology Department, Istanbul University-Cerrahpasa, Istanbul, Turkey.
Ahmet UstundagCerrahpaşa Medical Faculty, Radiology Department, Istanbul University-Cerrahpasa, Istanbul, Turkey.
Vefa SaltCerrahpaşa Medical Faculty, Radiology Department, Istanbul University-Cerrahpasa, Istanbul, Turkey.
Sebahat Nacar DoganRadiology Department, Istanbul Gaziosmanpasa Training and Research Hospital, Istanbul, Turkey.
Murat VeliogluRadiology Department, Istanbul Fatih Sultan Mehmet Training and Research Hospital, Istanbul, Turkey.
Hakan Hatem SelcukRadiology Department, Istanbul Bakırköy Sadi Konuk Training and Research Hospital, Istanbul, Turkey.
Batuhan KaraRadiology Department, Istanbul Bakırköy Sadi Konuk Training and Research Hospital, Istanbul, Turkey.
Ilkay OksuzDepartment of Software Engineering and Applied Sciences, Istanbul Technical University, Istanbul, Turkey.
Osman KizilkilicCerrahpaşa Medical Faculty, Radiology Department, Istanbul University-Cerrahpasa, Istanbul, Turkey.
Ercan KaraarslanDepartment of Radiology, Acibadem Mehmet Ali Aydinlar University School of Medicine, Istanbul, Turkey.
Istanbul University-Cerrahpaşa · TRBakırköy Dr.Sadi Konuk Eğitim ve Araştırma Hastanesi · TRBurdur Mehmet Akif Ersoy Üniversitesi · TRKent Hastanesi · TRBahçeşehir University · TRFatih Sultan Mehmet Eğitim Ve Araştırma Hastanesi · TRGaziosmanpaşa Taksim Eğitim ve Araştırma Hastanesi · TRIstanbul Technical University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is little evidence on the applicability of deep learning (DL) in the segmentation of acute ischemic lesions on diffusion-weighted imaging (DWI) between magnetic resonance imaging (MRI) scanners of different manufacturers. We retrospectively included DWI data of patients with acute ischemic lesions from six centers. Dataset A (n = 2986) and B (n = 3951) included data from Siemens and GE MRI scanners, respectively. The datasets were split into the training (80%), validation (10%), and internal test (10%) sets, and six neuroradiologists created ground-truth masks. Models A and B were the proposed neural networks trained on datasets A and B. The models subsequently fine-tuned across the datasets using their validation data. Another radiologist performed the segmentation on the test sets for comparisons. The median Dice scores of models A and B were 0.858 and 0.857 for the internal tests, which were non-inferior to the radiologist's performance, but demonstrated lower performance than the radiologist on the external tests. Fine-tuned models A and B achieved median Dice scores of 0.832 and 0.846, which were non-inferior to the radiologist's performance on the external tests. The present work shows that the inter-vendor operability of deep learning for the segmentation of ischemic lesions on DWI might be enhanced via transfer learning; thereby, their clinical applicability and generalizability could be improved.

Indexed as

AgedAged, 80 and overBrainDatasets as TopicDeep LearningDiffusion Magnetic Resonance ImagingFemaleHumansImage Interpretation, Computer-AssistedIschemic StrokeMaleMiddle AgedRadiologistsRetrospective Studies

Identifiers

PMID34127692
PMCPMC8203621
OpenAlexW3169377787

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.