Evidence map›Paper›PMID 34127649›Full record

ArticleHorticulture research2021

The role of auxin during early berry development in grapevine as revealed by transcript profiling from pollination to fruit set.

Francisca Godoy, Nathalie Kühn, Mindy Muñoz, Germán Marchandon, Satyanarayana Gouthu, Laurent Deluc, Serge Delrot, Virginie Lauvergeat, Patricio Arce-Johnson

Open access · goldAbstract read
In one paragraph

Article in Horticulture research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

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  17. Horticulture research · 2022
    Article
  18. Identification of a major QTL,Frontiers in plant science · 2022
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Francisca GodoyDepartamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Alameda 340, Santiago, Chile.ORCID http://orcid.org/0000-0002-3270-2299
Nathalie KühnFacultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, 2340025, Valparaíso, Chile.
Mindy MuñozDepartamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Alameda 340, Santiago, Chile.ORCID http://orcid.org/0000-0003-4856-2937
Germán MarchandonDepartamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Alameda 340, Santiago, Chile.
Satyanarayana GouthuDepartment of Horticulture, Oregon State University, Corvallis, OR, 97331, USA.
Laurent DelucDepartment of Horticulture, Oregon State University, Corvallis, OR, 97331, USA.ORCID http://orcid.org/0000-0002-6904-3741
Serge DelrotUMR Ecophysiologie et Génomique Fonctionnelle de la Vigne, ISVV, Université de Bordeaux, Villenave d´Ornon, France.
Virginie LauvergeatUMR Ecophysiologie et Génomique Fonctionnelle de la Vigne, ISVV, Université de Bordeaux, Villenave d´Ornon, France.
Patricio Arce-JohnsonDepartamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Alameda 340, Santiago, Chile. parce@bio.puc.cl.
Pontificia Universidad Católica de Chile · CLOregon State University · USUniversité de Bordeaux · FRPontificia Universidad Católica de Valparaíso · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin is a key phytohormone that modulates fruit formation in many fleshy fruits through the regulation of cell division and expansion. Auxin content rapidly increases after pollination and the manipulation in its levels may lead to the parthenocarpic development. ln Vitis vinifera L., little is known about the early fruit development that encompasses from pollination to fruit set. Pollination/fertilization events trigger fruit formation, and auxin treatment mimics their effect in grape berry set. However, the role of auxin in this process at the molecular level is not well understood. To elucidate the participation of auxin in grapevine fruit formation, morphological, reproductive, and molecular events from anthesis to fruit set were described in sequential days after pollination. Exploratory RNA-seq analysis at four time points from anthesis to fruit set revealed that the highest percentage of genes induced/repressed within the hormone-related gene category were auxin-related genes. Transcript profiling showed significant transcript variations in auxin signaling and homeostasis-related genes during the early fruit development. Indole acetic acid and several auxin metabolites were present during this period. Finally, application of an inhibitor of auxin action reduced cell number and the mesocarp diameter, similarly to unpollinated berries, further confirming the key role of auxin during early berry development. This work sheds light into the molecular features of the initial fruit development and highlights the auxin participation during this stage in grapevine.

Identifiers

PMID34127649
PMCPMC8203632
OpenAlexW3165944486

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.