Evidence map›Paper›PMID 34124262›Full record

ArticleBioMed research international2021

Altered Genes and Biological Functions in Response to Severe Burns.

Xinheng Liu, Yongxian Rong, Donglin Huang, Zhijie Liang, Xiaolin Yi, Fangxiao Wu, Dandan Zhu, Steven Mo, Wenhai Nong, Hongmian Li

Erratum issuedAbstract read
In one paragraph

Article in BioMed research international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Xinheng LiuDepartment of Burn and Plastic Surgery, Guiping People's Hospital, Ren-Min West Road, Guiping, Guangxi 537200, China.
Yongxian RongDepartment of Burn and Plastic Surgery, Guiping People's Hospital, Ren-Min West Road, Guiping, Guangxi 537200, China.
Donglin HuangDepartment of Plastic and Aesthetic Surgery, The Fifth Affiliated Hospital of Guangxi Medical University & The First People's Hospital of Nanning, NO.89, Qi-Xing Road, Nanning, Guangxi 530022, China.
Zhijie LiangDepartment of Plastic and Aesthetic Surgery, The Fifth Affiliated Hospital of Guangxi Medical University & The First People's Hospital of Nanning, NO.89, Qi-Xing Road, Nanning, Guangxi 530022, China.
Xiaolin YiDepartment of Plastic and Aesthetic Surgery, The Fifth Affiliated Hospital of Guangxi Medical University & The First People's Hospital of Nanning, NO.89, Qi-Xing Road, Nanning, Guangxi 530022, China.
Fangxiao WuDepartment of Plastic and Aesthetic Surgery, The Fifth Affiliated Hospital of Guangxi Medical University & The First People's Hospital of Nanning, NO.89, Qi-Xing Road, Nanning, Guangxi 530022, China.
Dandan ZhuDepartment of Plastic and Aesthetic Surgery, The Fifth Affiliated Hospital of Guangxi Medical University & The First People's Hospital of Nanning, NO.89, Qi-Xing Road, Nanning, Guangxi 530022, China.
Steven MoCAS Center for Excellence in Brain Science and Intelligence Technology, Shanghai 200031, China.ORCID https://orcid.org/0000-0002-4751-854X
Wenhai NongDepartment of Orthopedics, Binyang County People's Hospital, Binyang, China.ORCID https://orcid.org/0000-0003-4616-6711
Hongmian LiDepartment of Plastic and Aesthetic Surgery, The Fifth Affiliated Hospital of Guangxi Medical University & The First People's Hospital of Nanning, NO.89, Qi-Xing Road, Nanning, Guangxi 530022, China.ORCID https://orcid.org/0000-0001-9729-4129

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe burns are acute wounds caused by local heat exposure, resulting in life-threatening systemic effects and poor survival. However, the specific molecular mechanisms remain unclear. First, we downloaded gene expression data related to severe burns from the GEO database (GSE19743, GSE37069, and GSE77791). Then, a gene expression analysis was performed to identify differentially expressed genes (DEGs) and construct protein-protein interaction (PPI) network. The molecular mechanism was identified by enrichment analysis and Gene Set Enrichment Analysis. In addition, STEM software was used to screen for genes persistently expressed during response to severe burns, and receiver operating characteristic (ROC) curve was used to identify key DEGs. A total of 2631 upregulated and 3451 downregulated DEGs were identified. PPI network analysis clustered these DEGs into 13 modules. Importantly, module genes mostly related with immune responses and metabolism. In addition, we identified genes persistently altered during the response to severe burns corresponding to survival and death status. Among the genes with high area under the ROC curve in the PPI network gene, CCL5 and LCK were identified as key DEGs, which may affect the prognosis of burn patients. Gene set variation analysis showed that the immune response was inhibited and several types of immune cells were decreased, while the metabolic response was enhanced. The results showed that persistent gene expression changes occur in response to severe burns, which may underlie chronic alterations in physiological pathways. Identifying the key altered genes may reveal potential therapeutic targets for mitigating the effects of severe burns.

Indexed as

BurnsDatabases, Nucleic AcidGene Expression ProfilingComputational BiologyGene Regulatory NetworksHumansProtein Interaction MapsTranscriptomeTrauma Severity Indices

Identifiers

PMID34124262
PMCPMC8168476

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.