Evidence map›Paper›PMID 34123359›Full record

ArticleInterface focus2021

GSER (a Genome Size Estimator using R): a pipeline for quality assessment of sequenced genome libraries through genome size estimation.

Braulio Valdebenito-Maturana, Gonzalo Riadi

Abstract read
In one paragraph

Article in Interface focus, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Braulio Valdebenito-MaturanaNúcleo Científico Multidisciplinario, School of Medicine, Universidad de Talca, Campus Talca, Chile.
Gonzalo RiadiANID - Millennium Science Initiative Program, Millennium Nucleus of Ion Channels-Associated Diseases (MiNICAD); Center for Bioinformatics, Simulation and Modeling (CBSM); Department of Bioinformatics, Faculty of Engineering, University of Talca, Campus Talca, Chile.ORCID 0000-0002-7633-2365

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The first step in any genome research after obtaining the read data is to perform a due quality control of the sequenced reads. In a

Indexed as

genome assemblygenome librarygenome size estimationk-merquality control

Identifiers

PMID34123359
PMCPMC8193462

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.