Evidence map›Paper›PMID 34121135›Full record

ArticleActa parasitologica2021

Molecular Characterization and Haplotype Analyses of Lung Hydatid Cyst Isolates of Cattle and First Report of Echinococcus canadensis (G6/G7) in Cattle Isolates in Turkey.

Harun Kaya Kesik, Figen Celik, Sami Simsek, Seyma Gunyakti Kilinc, Haroon Ahmed, Abdurrahman Gul

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In one paragraph

Article in Acta parasitologica, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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  7. Investigation of MitochondrialIranian journal of parasitology
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Harun Kaya KesikDepartment of Parasitology, Faculty of Veterinary Medicine, Bingol University, Bingol, Turkey.
Figen CelikDepartment of Parasitology, Faculty of Veterinary Medicine, University of Firat, 23119, Elazig, Turkey.
Sami SimsekDepartment of Parasitology, Faculty of Veterinary Medicine, University of Firat, 23119, Elazig, Turkey. ssimsek@firat.edu.tr.ORCID http://orcid.org/0000-0002-3567-326X
Seyma Gunyakti KilincDepartment of Parasitology, Faculty of Veterinary Medicine, Bingol University, Bingol, Turkey.
Haroon AhmedDepartment of Biosciences, COMSATS University Islamabad (CUI), Islamabad, Pakistan.
Abdurrahman GulDepartment of Parasitology, Faculty of Veterinary Medicine, Bingol University, Bingol, Turkey.
Bingöl University · TRFırat University · TRCOMSATS University Islamabad · PK

Funding

Bingöl Üniversitesi BAP-VF.2019.00.002
6 · The paper itself

Abstract

purposeCystic echinococcosis (CE) is a zoonotic disease, caused by parasite known as Echinococcus granulosus sensu lato complex, leading to substantial economic losses in rural areas with public health problems. This study was carried out to understand the haplotypic profiles of the partial mitochondrial cytochrome c oxidase (mt-CO1) gene of cattle lung hydatid cyst samples which were obtained from two provinces in Turkey.

methodsIn this study, forty (n = 40) hydatid cyst samples from the lungs of slaughtered cattle were obtained. The germinal layers were taken separately for each individual cyst then stored in 70% ethanol. From each individual cyst sample, total genomic DNA was extracted. Amplification of the partial mt-CO1 gene (875 bp) was performed using a specific primer set by PCR, and then, the amplicons were sequenced. All sequences were analyzed individually, followed by alignment, and haplotype and phylogenetic analyses were then performed.

resultsBy the sequence alignment process, 39 out of the 40 sequences were characterized as E. granulosus sensu stricto. However, one of them was matched with E. canadensis (G6/G7). The haplotype analyses of the E. granulosus s.s. isolates were arranged in a star-like orientation with a main haplotype, which was separated from other haplotypes by 1-10 mutation steps, and 26 haplotypes were identified. In the mt-CO1 sequences, 29 polymorphic sites were determined, and 34.5% (10/29) of them were parsimony informative.

conclusionsThe findings of this study provide the first report of E. canadensis (G6/G7 genotype) among cattle in Turkey.

Indexed as

EchinococcosisEchinococcusEchinococcus granulosusAnimalsCattleGenotypeHaplotypesLungPhylogenyTurkeyCattleEchinococcus canadensisEchinococcus granulosus sensu strictoHydatid cystMt-CO1Turkey

Identifiers

PMID34121135
OpenAlexW3165912884

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.