Evidence map›Paper›PMID 34121037›Full record

ArticleMicrobes and environments2021

Structural Comparison of Diplonemid Communities around the Izu Peninsula, Japan.

Akinori Yabuki, Masaru Kawato, Yuriko Nagano, Shinji Tsuchida, Takao Yoshida, Yoshihiro Fujiwara

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Akinori YabukiDeep-Sea Biodiversity Research Group, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Masaru KawatoDeep-Sea Biodiversity Research Group, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Yuriko NaganoDeep-Sea Biodiversity Research Group, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Shinji TsuchidaDeep-Sea Biodiversity Research Group, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Takao YoshidaDeep-Sea Biodiversity Research Group, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Yoshihiro FujiwaraDeep-Sea Biodiversity Research Group, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).
Japan Agency for Marine-Earth Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diplonemea (diplonemids) is one of the most abundant and species-rich protist groups in marine environments; however, their community structures among local and seasonal samples have not yet been compared. In the present study, we analyzed four diplonemid community structures around the Izu Peninsula, Japan using barcode sequences amplified from environmental DNA. These sequences and the results of statistical analyses indicated that communities at the same site were more similar to each other than those in the same season. Environmental variables were also measured, and their influence on diplonemid community structures was examined. Salinity, electrical conductivity, and temperature, and their correlated variables, appeared to influence the structures of diplonemid communities, which was consistent with previous findings; however, since the results obtained did not reach statistical significance, further studies are required. A comparison of each diplonemid community indicated that some lineages were unique to specific samples, while others were consistently detected in all samples. Members of the latter type are cosmopolitan candidates and may be better adapted to the environments of the studied area. Future studies that focus on the more adaptive members will provide a more detailed understanding of the mechanisms by which diplonemids are widely distributed in marine environments and will facilitate their utilization as indicator organisms to monitor environmental changes.

Indexed as

EuglenozoaJapanPhylogenyRNA, Ribosomal, 18SSeawaterRNA, Ribosomal, 18Scommunity structurecosmopolitan speciesdiplonemideDNA

Identifiers

PMID34121037
PMCPMC8209450
OpenAlexW3166167545

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.