Evidence map›Paper›PMID 34120219›Full record

ArticleRheumatology international2022

Sequence analysis in Familial Mediterranean Fever patients with no confirmatory genotype.

Vasiliki Sgouropoulou, Evangelia Farmaki, Theophanis Papadopoulos, Vasiliki Tzimouli, Jenny Pratsidou-Gertsi, Maria Trachana

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Article in Rheumatology international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Vasiliki Sgouropoulou1st Department of Paediatrics, Paediatric Immunology and Rheumatology Referral Center, Hippokration General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece. vsgouro@hotmail.com.ORCID 0000-0003-2947-3234
Evangelia Farmaki1st Department of Paediatrics, Paediatric Immunology and Rheumatology Referral Center, Hippokration General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece.ORCID 0000-0002-5132-8255
Theophanis PapadopoulosKaryo Centre, Laboratory of Molecular Biology and Genetics, Karyo Center, Thessaloniki, Greece.ORCID 0000-0003-3123-0725
Vasiliki Tzimouli1st Department of Paediatrics, Paediatric Immunology and Rheumatology Referral Center, Hippokration General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece.ORCID 0000-0001-8076-4155
Jenny Pratsidou-Gertsi1st Department of Paediatrics, Paediatric Immunology and Rheumatology Referral Center, Hippokration General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece.ORCID 0000-0003-4565-369X
Maria Trachana1st Department of Paediatrics, Paediatric Immunology and Rheumatology Referral Center, Hippokration General Hospital, Aristotle University of Thessaloniki, Thessaloniki, Greece.ORCID 0000-0003-3454-4172

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

INTRODUCTION/

objectivesFamilial Mediterranean Fever (FMF) is a genetic disorder of the innate immunity characterized by chronic inflammatory state. The diagnosis is mainly based on clinical criteria and supported by genotyping, especially in atypical phenotypes. The primary objective was to depict the Familial Mediterranean Fever (FMF) genotype of Greek patients and investigate the contribution of Next Generation Sequencing (NGS) beyond the contemporary techniques [(Polymerase Chain Reaction (PCR)/hybridization and Non-Isotopic RNase Cleavage Assay (NIRCA). The secondary objective was to unravel any associations between the mutated genes with the disease course and response to treatment.

methodsIn this single center, retrospective study 31 patients with clinical diagnosis with FMF, but non-conclusive genetic analysis with PCR/hybridization and NIRCA, underwent NGS genotyping.

resultsPCR/NIRCA detected ≥ 1 mutation in 25/31 patients, most frequently M694V (29%), while NGS in 26/31 (83.9%), most frequently R202Q (61.3%). NGS genetically confirmed the clinical diagnosis (heterozygosity to compound or complex genotype) in 19 (61.3%) patients of our cohort. R202Q was significantly more prevalent by NGS than by contemporary techniques (61.3 vs 12.9%, p = 0.0002) and was associated with FMF. Rare mutations were detected by NGS in 19.2% patients.

conclusionNGS clarifies the genetic profile of patients with atypical phenotypes and supports therapeutic management decisions. NGS unveiled the frequent involvement of R202Q in the pathogenesis of our FMF patients.

Indexed as

High-Throughput Nucleotide SequencingAdolescentAdultChildFamilial Mediterranean FeverFemaleGenotypeHumansMaleMutationPolymerase Chain ReactionRetrospective StudiesYoung AdultFamilial Mediterranean feverGeneticsGenotypeMutationsNext generation sequencing

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.