Evidence map›Paper›PMID 34117909›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Disparate genetic variants associated with distinct components of cowpea resistance to the seed beetle Callosobruchus maculatus.

Frank J Messina, Alexandra M Lish, Zachariah Gompert

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Cowpea Constraints and Breeding in Europe.Plants (Basel, Switzerland) · 2023
    Review
  2. Article
  3. Additive genetic effects in interacting species jointly determine the outcome of caterpillar herbivory.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Frank J MessinaDepartment of Biology, Utah State University, Logan, UT, 84322, USA.
Alexandra M LishDepartment of Biology, Utah State University, Logan, UT, 84322, USA.
Zachariah GompertDepartment of Biology, Utah State University, Logan, UT, 84322, USA. zach.gompert@usu.edu.ORCID http://orcid.org/0000-0003-2248-2488
Utah State University · US

Funding

Directorate for Biological Sciences 1638768Utah Agricultural Experiment Station 1015989
6 · The paper itself

Abstract

key messagePolygenic genome-wide association mapping identified two regions of the cowpea genome associated with different components of resistance to its major post-harvest pest, the seed beetle Callosobruchus maculatus. Cowpea (Vigna unguiculata) is an important grain and fodder crop in arid and semi-arid regions of Africa, Asia, and South America, where the cowpea seed beetle, Callosobruchus maculatus, is a serious post-harvest pest. Development of cultivars resistant to C. maculatus population growth in storage could increase grain yield and quality and reduce reliance on insecticides. Here, we use a MAGIC (multi-parent, advanced-generation intercross) population of cowpea consisting of 305 recombinant inbred lines (RILs) to identify genetic variants associated with resistance to seed beetles. Because inferences regarding the genetic basis of resistance may depend on the source of the pest or the assay protocol, we used two divergent geographic populations of C. maculatus and two complementary assays to measure several aspects of resistance. Using polygenic genome-wide association mapping models, we found that the cowpea RILs harbor substantial additive-genetic variation for most resistance measures. Variation in several components of resistance, including larval development time and survival, was largely explained by one or several linked loci on chromosome 5. A second region on chromosome 8 explained increased seed resistance via the induction of early-exiting larvae. Neither of these regions contained genes previously associated with resistance to insects that infest grain legumes. We found some evidence of gene-gene interactions affecting resistance, but epistasis did not contribute substantially to resistance variation in this mapping population. The combination of mostly high heritabilities and a relatively consistent and simple genetic architecture increases the feasibility of breeding for enhanced resistance to C. maculatus.

Indexed as

Genetic VariationAnimalsChromosome MappingChromosomes, PlantColeopteraDisease ResistanceGene Expression Regulation, PlantGenome-Wide Association StudyPlant DiseasesPlant ProteinsVignaPlant Proteins

Identifiers

PMID34117909
OpenAlexW3130809728

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.