Evidence map›Paper›PMID 34117322›Full record

ArticleThe ISME journal2021

Novel clades of soil biphenyl degraders revealed by integrating isotope probing, multi-omics, and single-cell analyses.

Song-Can Chen, Rohit Budhraja, Lorenz Adrian, Federica Calabrese, Hryhoriy Stryhanyuk, Niculina Musat, Hans-Hermann Richnow, Gui-Lan Duan, Yong-Guan Zhu, Florin Musat

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 32 citations in OpenAlex.

  1. Applied and environmental microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Song-Can ChenDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.ORCID http://orcid.org/0000-0002-1531-9511
Rohit BudhrajaDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.
Lorenz AdrianDepartment Environmental Biotechnology, Helmholtz Centre for Environmental Research-UFZ, Leipzig, Germany.ORCID http://orcid.org/0000-0001-8205-0842
Federica CalabreseDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.ORCID http://orcid.org/0000-0002-4660-1405
Hryhoriy StryhanyukDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.
Niculina MusatDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.ORCID http://orcid.org/0000-0001-9539-189X
Hans-Hermann RichnowDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.
Gui-Lan DuanState Key Lab of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 100085, Beijing, China.
Yong-Guan ZhuState Key Lab of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 100085, Beijing, China. ygzhu@rcees.ac.cn.ORCID http://orcid.org/0000-0003-3861-8482
Florin MusatDepartment of Isotope Biogeochemistry, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany. florin.musat@ufz.de.ORCID http://orcid.org/0000-0002-4240-3495
Helmholtz Centre for Environmental Research · DEChinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most microorganisms in the biosphere remain uncultured and poorly characterized. Although the surge in genome sequences has enabled insights into the genetic and metabolic properties of uncultured microorganisms, their physiology and ecological roles cannot be determined without direct probing of their activities in natural habitats. Here we employed an experimental framework coupling genome reconstruction and activity assays to characterize the largely uncultured microorganisms responsible for aerobic biodegradation of biphenyl as a proxy for a large class of environmental pollutants, polychlorinated biphenyls. We used

Indexed as

SoilSoil PollutantsBiodegradation, EnvironmentalBiphenyl CompoundsIsotopesSingle-Cell AnalysisSoil MicrobiologybiphenylBiphenyl CompoundsIsotopesSoilSoil Pollutants

Identifiers

PMID34117322
PMCPMC8630052
OpenAlexW3166185745

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.