Evidence map›Paper›PMID 34117075›Full record

ArticleCold Spring Harbor molecular case studies2021

Postmortem whole-genome sequencing on a dried blood spot identifies a novel homozygous SUOX variant causing isolated sulfite oxidase deficiency.

Mallory J Owen, Jerica Lenberg, Annette Feigenbaum, Jeffrey Gold, Kevin Chau, Zaira Bezares-Orin, Yan Ding, Shimul Chowdhury, Stephen F Kingsmore

Open access · diamondAbstract read
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Mallory J OwenRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Jerica LenbergRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Annette FeigenbaumRady Children's Hospital, San Diego, California 92123, USA.
Jeffrey GoldRady Children's Hospital, San Diego, California 92123, USA.
Kevin ChauRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Zaira Bezares-OrinRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Yan DingRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Shimul ChowdhuryRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Stephen F KingsmoreRady Children's Institute for Genomic Medicine, San Diego, California 92123, USA.
Rady Children's Hospital-San Diego · USChildren’s Institute · US

Funding

Genomic and Environmental Determinants of Infant Deaths in San Diego County in 2015-2022R01HD101540 · NICHD · RADY PEDIATRIC GENOMICS & SYSTEMS MEDICINE INSTITUTE · PI CHAMBERS, CHRISTINA, KINGSMORE, STEPHEN FRANCIS · 2020 to 2024
$3.5M
NICHD NIH HHS R01 HD101540
6 · The paper itself

Abstract

Rapid whole-genome sequencing (rWGS) has shown that genetic diseases are a common cause of infant mortality in neonatal intensive care units. Dried blood spots collected for newborn screening allow investigation of causes of infant mortality that were not diagnosed during life. Here, we present a neonate who developed seizures and encephalopathy on the third day of life that was refractory to antiepileptic medications. The patient died on day of life 16 after progressive respiratory failure and sepsis. The parents had lost two prior children after similar presentations, neither of whom had a definitive diagnosis. Postmortem rWGS of a dried blood spot identified a pathogenic homozygous frameshift variant in the

Indexed as

HomozygoteWhole Genome SequencingAmino Acid Metabolism, Inborn ErrorsCerebral CortexChild, PreschoolConsanguinityFemaleFrameshift MutationHumansInfantInfant, NewbornMagnetic Resonance ImagingMiddle AgedOxidoreductases Acting on Sulfur Group DonorsPedigreePregnancyOxidoreductases Acting on Sulfur Group DonorsSulfite OxidaseSUOX protein, humanabnormality of urinary uric acid concentrationcentral hypotoniaepisodic respiratory distressepisodic tachypneageneralized tonic seizureslimb hypertonia

Identifiers

PMID34117075
PMCPMC8208044
OpenAlexW3170252569

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.