Evidence map›Paper›PMID 34117062›Full record

ArticleScience advances2021

Quantitative description of a contractile macromolecular machine.

Alec Fraser, Nikolai S Prokhorov, Fang Jiao, B Montgomery Pettitt, Simon Scheuring, Petr G Leiman

Abstract read
In one paragraph

Article in Science advances, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Structural atlas ofbioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. The spike tip protein of bacteriophage T4.bioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Article
  11. Science advances · 2025
    Article
  12. Physics of a super-fast viral jab.Biophysical journal · 2025
    Article
  13. Article
  14. Review
  15. Viral Genome Delivery Across Bacterial Cell Surfaces.Annual review of microbiology · 2024
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Alec FraserDepartment of Biochemistry and Molecular Biology, Sealy Center for Structural Biology and Molecular Biophysics (SCSB), The University of Texas Medical Branch at Galveston, Galveston, TX 77555, USA.ORCID http://orcid.org/0000-0001-8084-1392
Nikolai S ProkhorovDepartment of Biochemistry and Molecular Biology, Sealy Center for Structural Biology and Molecular Biophysics (SCSB), The University of Texas Medical Branch at Galveston, Galveston, TX 77555, USA.ORCID http://orcid.org/0000-0001-9621-0245
Fang JiaoDepartment of Anesthesiology, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA.ORCID http://orcid.org/0000-0001-5087-6228
B Montgomery PettittDepartment of Biochemistry and Molecular Biology, Sealy Center for Structural Biology and Molecular Biophysics (SCSB), The University of Texas Medical Branch at Galveston, Galveston, TX 77555, USA.ORCID http://orcid.org/0000-0003-4902-3046
Simon ScheuringDepartment of Anesthesiology, Weill Cornell Medicine, 1300 York Avenue, New York, NY 10065, USA. pgleiman@utmb.edu sis2019@med.cornell.edu.ORCID http://orcid.org/0000-0003-3534-069X
Petr G LeimanDepartment of Biochemistry and Molecular Biology, Sealy Center for Structural Biology and Molecular Biophysics (SCSB), The University of Texas Medical Branch at Galveston, Galveston, TX 77555, USA. pgleiman@utmb.edu sis2019@med.cornell.edu.ORCID http://orcid.org/0000-0002-9091-0918

Funding

Structural and functional determinants of decision-making in bacteriophage host recognitionR01GM139034 · NIGMS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI LEIMAN, PETR G · 2020 to 2023
$1.7M
NIGMS NIH HHS R01 GM139034
6 · The paper itself

Abstract

Contractile injection systems (CISs) [type VI secretion system (T6SS), phage tails, and tailocins] use a contractile sheath-rigid tube machinery to breach cell walls and lipid membranes. The structures of the pre- and postcontraction states of several CISs are known, but the mechanism of contraction remains poorly understood. Combining structural information of the end states of the 12-megadalton R-type pyocin sheath-tube complex with thermodynamic and force spectroscopy analyses and an original modeling procedure, we describe the mechanism of pyocin contraction. We show that this nanomachine has an activation energy of 160 kilocalories/mole (kcal/mol), and it releases 2160 kcal/mol of heat and develops a force greater than 500 piconewtons. Our combined approach provides a quantitative and experimental description of the membrane penetration process by a CIS.

Identifiers

PMID34117062
PMCPMC8195476

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.