Evidence map›Paper›PMID 34117034›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2021

Identification of a Novel Inflamed Tumor Microenvironment Signature as a Predictive Biomarker of Bacillus Calmette-Guérin Immunotherapy in Non-Muscle-Invasive Bladder Cancer.

Jeffrey S Damrauer, Kyle R Roell, Markia A Smith, Xuezheng Sun, Erin L Kirk, Katherine A Hoadley, Halei C Benefield, Gopakumar Iyer, David B Solit, Matthew I Milowsky and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 50 citations in OpenAlex.

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  19. The Multi-Dimensional Biomarker Landscape in Cancer Immunotherapy.International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 1 country.

Jeffrey S Damrauer *University of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.ORCID 0000-0001-8148-0285
Kyle R Roell *University of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.ORCID 0000-0001-7491-6095
Markia A Smith *University of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.ORCID 0000-0002-7114-3776
Xuezheng SunUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.
Erin L KirkUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.
Katherine A HoadleyUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.ORCID 0000-0002-1216-477X
Halei C BenefieldDepartment of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.ORCID 0000-0003-1400-5374
Gopakumar IyerDepartment of Medicine (Genitourinary Oncology Service), Memorial Sloan Kettering Cancer Center, New York, New York.
David B SolitDepartment of Medicine (Genitourinary Oncology Service), Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0002-6614-802X
Matthew I MilowskyUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.
William Y KimUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.ORCID 0000-0001-7922-2156
Matthew E NielsenDepartment of Urology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Sara E WobkerUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.ORCID 0000-0001-5324-4197
Guido DalbagniDepartment of Surgery (Urology Service), Memorial Sloan Kettering Cancer Center, New York, New York.
Hikmat A Al-AhmadieDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0002-2938-6627
Andrew F OlshanUniversity of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.
Bernard H BochnerDepartment of Surgery (Urology Service), Memorial Sloan Kettering Cancer Center, New York, New York.
Helena FurbergDepartment of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, New York.
Melissa A Troester *University of North Carolina Lineberger Comprehensive Cancer Center, Chapel Hill, North Carolina.
Eugene J Pietzak *Department of Surgery (Urology Service), Memorial Sloan Kettering Cancer Center, New York, New York. pietzake@mskcc.org.
University of North Carolina at Chapel Hill · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Disparities in COVID Disease Severity and Outcomes in New York CityUL1TR002384 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JULIANNE L IMPERATO-MCGINLEY · 2017 to 2026
$86.2M
Tissue Procurement & PathologyP50CA058223 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KATHERINE A. HOADLEY · 1992 to 2026
$59.3M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
Biostatstics for Research in Environmental HealthT32ES007018 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel, Rebecca Fry · 1985 to 2026
$31.3M
SPORE in Bladder CancerP50CA221745 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI OSTROVNAYA, IRINA · 2018 to 2024
$11.8M
MSK Paul Calabresi Career Development Award for Clinical OncologyK12CA184746 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI Omar Abdel-Wahab, Simon N. Powell · 2015 to 2026
$8.3M
Cancer Control Education ProgramT32CA057726 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa B Gilkey, Melissa A. Troester · 2017 to 2026
$3.7M
P53, DNA Repair Imbalance, and Immune Response in Breast Cancer Mortality DisparitiesR01CA253450 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KATHERINE A. HOADLEY, Melissa A. Troester · 2021 to 2026
$3.6M
The role of estrogen receptor in breast cancer outcomes and the effect of exposure historyF30CA236199 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BENEFIELD, HALEI · 2019 to 2021
$121k
NCATS NIH HHS UL1 TR002384NCI NIH HHS F30 CA236199NCI NIH HHS K12 CA184746NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA058223NCI NIH HHS P50 CA221745NCI NIH HHS R01 CA253450NCI NIH HHS T32 CA057726NIEHS NIH HHS P30 ES010126NIEHS NIH HHS T32 ES007018
6 · The paper itself

Abstract

purposeImproved risk stratification and predictive biomarkers of treatment response are needed for non-muscle-invasive bladder cancer (NMIBC). Here we assessed the clinical utility of targeted RNA and DNA molecular profiling in NMIBC. EXPERIMENTAL

designGene expression in NMIBC samples was profiled by NanoString nCounter, an RNA quantification platform, from two independent cohorts (

resultsMolecular subtypes distinguished between low-grade Ta tumors with FGFR3 mutations and overexpression (UROMOL-class 1) and tumors with more aggressive clinicopathologic characteristics (UROMOL-classes 2 and 3), which were significantly enriched with TERT promoter mutations. However, UROMOL subclasses were not associated with recurrence after bacillus Calmette-Guérin (BCG) immunotherapy in two independent cohorts. In contrast, a novel expression signature of an inflamed tumor microenvironment (TME) was associated with improved recurrence-free survival after BCG. Expression of immune checkpoint genes (PD-L1/PD-1/CTLA-4) was associated with an inflamed TME, but not with higher recurrence rates after BCG. FGFR3 mutations and overexpression were both associated with low immune signatures.

conclusionsAssessment of the immune TME, rather than molecular subtypes, is a promising predictive biomarker of BCG response. Modulating the TME in an immunologically "cold" tumor warrants further investigation. Integrated transcriptomic and exome sequencing should improve treatment selection in NMIBC.

Indexed as

TranscriptomeTumor MicroenvironmentAdjuvants, ImmunologicAgedBCG VaccineFemaleHumansInflammationMaleMiddle AgedMutationNeoplasm InvasivenessTreatment OutcomeUrinary Bladder NeoplasmsAdjuvants, ImmunologicBCG Vaccine

Identifiers

PMID34117034
PMCPMC8416390
OpenAlexW3170681543

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.